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AT2G46520.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27122571 (2016): mitochondrion
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative; FUNCTIONS IN: protein transporter activity, importin-alpha export receptor activity, binding; INVOLVED IN: intracellular protein transport, cell proliferation, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, membrane, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Importin-beta, N-terminal (InterPro:IPR001494), CAS/CSE, C-terminal (InterPro:IPR005043), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Exportin/Importin, Cse1-like (InterPro:IPR013713); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G59020.2); Has 1154 Blast hits to 1141 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 461; Fungi - 384; Plants - 163; Viruses - 0; Other Eukaryotes - 146 (source: NCBI BLink).
Protein Annotations
BioGrid:4598eggNOG:COG5657eggNOG:KOG1992EMBL:AC006418
EMBL:AC006526EMBL:AJ297282EMBL:AK222100EMBL:CP002685
EnsemblPlants:AT2G46520EnsemblPlants:AT2G46520.1entrez:819263Gene3D:1.25.10.10
GeneID:819263Genevisible:Q9ZPY7GO:GO:0005634GO:GO:0005829
GO:GO:0006886GO:GO:0009506GO:GO:0016020Gramene:AT2G46520.1
HOGENOM:HOG000201317InParanoid:Q9ZPY7InterPro:IPR001494InterPro:IPR005043
InterPro:IPR011989InterPro:IPR013713InterPro:IPR016024iPTMnet:Q9ZPY7
KEGG:ath:AT2G46520KO:K18423OMA:QFVTAVWPaxDb:Q9ZPY7
Pfam:PF03378Pfam:PF03810Pfam:PF08506Pfam:Q9ZPY7
Pfscan:PS50166PhylomeDB:Q9ZPY7PIR:H84903PRIDE:Q9ZPY7
PRO:PR:Q9ZPY7PROSITE:PS50166ProteinModelPortal:Q9ZPY7Proteomes:UP000006548
RefSeq:NP_182175.1SMART:SM00913SMR:Q9ZPY7STRING:3702.AT2G46520.1
SUPFAM:SSF48371SwissPalm:Q9ZPY7TAIR:AT2G46520UniGene:At.36499
UniGene:At.67632UniProt:Q9ZPY7
Coordinates (TAIR10) chr2:+:19096867..19099785
Molecular Weight (calculated) 108663.00 Da
IEP (calculated) 5.29
GRAVY (calculated) 0.02
Length 972 amino acids
Sequence (TAIR10)
(BLAST)
001: MEWNRETLVF LSQCFLNTLS PIPEPRRTAE RALSDAADQA NYGLAVLRLV AEPAIDEQTR HAAAVNFKNH LRSRWHPAGD SGISPIVDSE KEQIKTLIVS
101: LMLSASPRIQ SQLSEALTVI GKHDFPKAWP ALLPELIANL QNAALAGDYV SVNGILGTAS SIFKKFSYEY RTDALFVDLK YCLDNFAAPL TEIFLKTSSL
201: IDSAASSGGS PPILKPLFES QRLCCTIFYS LNFQDLPEFF EDHMKEWMGE FKKYLSSNYP ALESTEEGLT LVDDLRAAIC ENINHYIEKN EEEFQGFLNE
301: FASVVWTLLR DVSKSPSRDQ LATTAIKFLT SVSTSVHHAL FAGDNVIKEI CQSIVIPNVS LRVEDEEIFE MNYIEFIRRD MEGSDVDTRR RIACELLKGL
401: ATNYKTQVTE VVSLEIQRLL SSFSANPSAN WKDKDCAIYL VVSLSTKKAG GASVSTDLID VQNFFANIIL PELQSRDVNS FPMLKAGSLK FLTMFRSHIP
501: KPFAMQLFPE LVRFLKAESN VVHSYAASCI EKLLLVKEEG ARGNRYAAGD LSPFLLQLMT NLFDALKFPE SEENQYLMKC IMRVLGVADI SAEVAGPCIG
601: GLTSILSEVC KNPKNPIFNH YLFESVAVLV RRACERDISL ISAFETSLFP SLQMILANDI TEFLPYGFQL LAQLVELNRP TLSPNYMQIF LLLLSPESWK
701: RSGNVPALVR LLQAFLQKAP HEVTQENRLS QVLGIFEKLV ASPSTDEQGF YILNTIIENL DYSVIAPYMK GVWSALFTRV QNKKTVKFQK SLVIFMSLFL
801: VKHGQAYLVE TMNTVQPNII TAIVEHFWIP NLKLIMGSME VKLTAVAATR LICETPALLD PSAAKLWGKM LDSIVTLVSR PEQERVLDEP EMPEISENVG
901: YTAAFVKLHN AGKKEEDPLK DIKDPKQFLV ASVSRLSSAS PGRYPQIIGE NLEQANQTAL IQLCNAYNCG IA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)