suba logo
AT2G43020.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
peroxisome 0.989
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : polyamine oxidase 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
polyamine oxidase 2 (PAO2); FUNCTIONS IN: primary amine oxidase activity, oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Flavin-containing amine oxidase (InterPro:IPR001613); BEST Arabidopsis thaliana protein match is: polyamine oxidase 3 (TAIR:AT3G59050.1); Has 6381 Blast hits to 5960 proteins in 1057 species: Archae - 96; Bacteria - 2371; Metazoa - 1412; Fungi - 575; Plants - 752; Viruses - 0; Other Eukaryotes - 1175 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G43020-MONOMERBioGrid:4241BRENDA:1.5.3.17EC:1.5.3.-
eggNOG:ENOG410IUNJeggNOG:ENOG410XQHSEMBL:AC006224EMBL:AF364952
EMBL:AY074846EMBL:BT029025EMBL:CP002685EnsemblPlants:AT2G43020
EnsemblPlants:AT2G43020.1entrez:818904Gene3D:3.50.50.60GeneID:818904
Genevisible:Q9SKX5GO:GO:0005777GO:GO:0006598GO:GO:0046592
Gramene:AT2G43020.1gramene_pathway:1.5.3.14gramene_pathway:1.5.3.16gramene_pathway:PWY-3981-ARA
gramene_pathway:PWY-6441hmmpanther:PTHR10742hmmpanther:PTHR10742:SF238HOGENOM:HOG000037651
InParanoid:Q9SKX5InterPro:IPR001613InterPro:IPR002937InterPro:IPR023753
KEGG:ath:AT2G43020KO:K17839OMA:MRRANCFPaxDb:Q9SKX5
Pfam:PF01593Pfam:Q9SKX5PhylomeDB:Q9SKX5PIR:A84861
PRIDE:Q9SKX5PRINTS:PR00757PRO:PR:Q9SKX5ProteinModelPortal:Q9SKX5
Proteomes:UP000006548RefSeq:NP_181830.1SMR:Q9SKX5STRING:3702.AT2G43020.1
SUPFAM:SSF51905SUPFAM:SSF54373TAIR:AT2G43020tair10-symbols:ATPAO2
tair10-symbols:PAO2UniGene:At.27901UniProt:Q9SKX5
Coordinates (TAIR10) chr2:+:17891945..17894440
Molecular Weight (calculated) 54324.20 Da
IEP (calculated) 5.99
GRAVY (calculated) -0.12
Length 490 amino acids
Sequence (TAIR10)
(BLAST)
001: MESRKNSDRQ MRRANCFSAG ERMKTRSPSV IVIGGGFGGI SAARTLQDAS FQVMVLESRD RIGGRVHTDY SFGFPVDLGA SWLHGVCKEN PLAPVIGRLG
101: LPLYRTSGDN SVLYDHDLES YALFDMDGNQ VPQELVTQIG VTFERILEEI NKVRDEQDAD ISISQAFSIV FSRKPELRLE GLAHNVLQWY VCRMEGWFAA
201: DAETISAKCW DQEELLPGGH GLMVRGYRPV INTLAKGLDI RVGHRVTKIV RRYNGVKVTT ENGQTFVADA AVIAVPLGVL KSGTIKFEPK LPEWKQEAIN
301: DLGVGIENKI ILHFEKVFWP KVEFLGVVAE TSYGCSYFLN LHKATGHPVL VYMPAGQLAK DIEKMSDEAA ANFAVLQLQR ILPDALPPVQ YLVSRWGSDV
401: NSMGSYSYDI VGKPHDLYER LRVPVDNLFF AGEATSSSFP GSVHGAYSTG LMAAEDCRMR VLERYGELDL FQPVMGEEGP ASVPLLISRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)