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AT3G05640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.981
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: response to water deprivation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT5G27930.2); Has 5684 Blast hits to 5679 proteins in 292 species: Archae - 2; Bacteria - 4; Metazoa - 1387; Fungi - 671; Plants - 2430; Viruses - 5; Other Eukaryotes - 1185 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G05640-MONOMERBioCyc:ARA:GQT-978-MONOMERBioGrid:5066EC:3.1.3.16
eggNOG:COG0631eggNOG:KOG0698EMBL:AC011620EMBL:AK316795
EMBL:AY050388EMBL:AY093799EMBL:CP002686EnsemblPlants:AT3G05640
EnsemblPlants:AT3G05640.1EnsemblPlants:AT3G05640.2entrez:819731Gene3D:3.60.40.10
GeneID:819731Genevisible:Q9M9W9GO:GO:0004722GO:GO:0009414
GO:GO:0046872Gramene:AT3G05640.1Gramene:AT3G05640.2hmmpanther:PTHR13832
hmmpanther:PTHR13832:SF198HOGENOM:HOG000233897InParanoid:Q9M9W9IntAct:Q9M9W9
InterPro:IPR001932InterPro:IPR015655KEGG:ath:AT3G05640MINT:MINT-8390485
OMA:LCHWQEAPANTHER:PTHR13832PaxDb:Q9M9W9Pfam:PF00481
Pfam:Q9M9W9Pfscan:PS51746PhylomeDB:Q9M9W9PRO:PR:Q9M9W9
PROSITE:PS51746ProteinModelPortal:Q9M9W9Proteomes:UP000006548RefSeq:NP_187215.1
RefSeq:NP_974230.1SMART:SM00332SMR:Q9M9W9STRING:3702.AT3G05640.1
SUPFAM:SSF81606TAIR:AT3G05640UniGene:At.26583UniGene:At.70680
UniProt:Q9M9W9
Coordinates (TAIR10) chr3:-:1640610..1642227
Molecular Weight (calculated) 39782.30 Da
IEP (calculated) 6.91
GRAVY (calculated) -0.24
Length 358 amino acids
Sequence (TAIR10)
(BLAST)
001: MGHFSSMFNG IARSFSIKKA KNINSSKSYA KEATDEMARE AKKKELILRS SGCINADGSN NLASVFSRRG EKGVNQDCAI VWEGYGCQED MIFCGIFDGH
101: GPWGHFVSKQ VRNSMPISLL CNWKETLSQT TIAEPDKELQ RFAIWKYSFL KTCEAVDLEL EHHRKIDSFN SGTTALTIVR QGDVIYIANV GDSRAVLATV
201: SDEGSLVAVQ LTVDFKPNLP QEEERIIGCN GRVFCLQDEP GVHRVWQPVD ESPGLAMSRA FGDYCIKDYG LVSVPEVTQR HISIRDQFII LATDGVWDVI
301: SNQEAIDIVS STAERAKAAK RLVQQAVRAW NRKRRGIAMD DISAVCLFFH SSSSSPSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)