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AT2G41560.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 1.000
ASURE: vacuole
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:11115896 (2000): plant-type vacuole
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28611809 (2017): cytosol
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25641898 (2015): plasma membrane
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22923678 (2012): plant-type vacuole
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:16618929 (2006): plant-type vacuole
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : autoinhibited Ca(2+)-ATPase, isoform 4
Curator
Summary (TAIR10)
encodes a calmodulin-regulated Ca(2+)-ATPase that improves salt tolerance in yeast. localized to the vacuole.
Computational
Description (TAIR10)
autoinhibited Ca(2+)-ATPase, isoform 4 (ACA4); FUNCTIONS IN: calcium-transporting ATPase activity, calmodulin binding; INVOLVED IN: in 6 processes; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, calcium-transporting, PMCA-type (InterPro:IPR006408), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), ATPase, P-type cation-transporter, N-terminal (InterPro:IPR004014), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303), ATPase, P-type cation-transporter, C-terminal (InterPro:IPR006068); BEST Arabidopsis thaliana protein match is: autoinhibited Ca2+-ATPase 11 (TAIR:AT3G57330.1); Has 45699 Blast hits to 34603 proteins in 3211 species: Archae - 845; Bacteria - 31242; Metazoa - 4073; Fungi - 2705; Plants - 2048; Viruses - 3; Other Eukaryotes - 4783 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G41560-MONOMERBioGrid:4091EC:3.6.3.8eggNOG:ENOG410XNNC
eggNOG:KOG0204EMBL:AC002510EMBL:AF200739EMBL:CP002685
EnsemblPlants:AT2G41560EnsemblPlants:AT2G41560.1entrez:818754Gene3D:1.20.1110.10
Gene3D:3.40.1110.10GeneID:818754Genevisible:O22218GO:GO:0000325
GO:GO:0005388GO:GO:0005516GO:GO:0005524GO:GO:0005773
GO:GO:0005774GO:GO:0005887GO:GO:0009507GO:GO:0009624
GO:GO:0009705GO:GO:0042742GO:GO:0043069GO:GO:0046872
GO:GO:0055081Gramene:AT2G41560.1hmmpanther:PTHR24093hmmpanther:PTHR24093:SF296
HOGENOM:HOG000265623InParanoid:O22218InterPro:IPR001757InterPro:IPR004014
InterPro:IPR006068InterPro:IPR006408InterPro:IPR008250InterPro:IPR018303
InterPro:IPR023214InterPro:IPR023298InterPro:IPR023299InterPro:IPR024750
iPTMnet:O22218KEGG:ath:AT2G41560KO:K01537OMA:PIREKIF
PaxDb:O22218Pfam:O22218Pfam:PF00122Pfam:PF00689
Pfam:PF00690Pfam:PF00702Pfam:PF12515PhylomeDB:O22218
PIR:T00812PRIDE:O22218PRINTS:PR00120PRO:PR:O22218
PROSITE:PS00154ProteinModelPortal:O22218Proteomes:UP000006548Reactome:R-ATH-418359
Reactome:R-ATH-5578775Reactome:R-ATH-936837RefSeq:NP_181687.1scanprosite:PS00154
SMART:SM00831SMR:O22218STRING:3702.AT2G41560.1SUPFAM:0049471
SUPFAM:0049473SUPFAM:SSF56784SUPFAM:SSF81660TAIR:AT2G41560
tair10-symbols:ACA4TIGRfam:TIGR01494TIGRfam:TIGR01517TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01517TMHMM:TMhelixUniGene:At.24960UniGene:At.67009
UniProt:O22218
Coordinates (TAIR10) chr2:-:17332256..17337179
Molecular Weight (calculated) 112756.00 Da
IEP (calculated) 5.94
GRAVY (calculated) 0.12
Length 1030 amino acids
Sequence (TAIR10)
(BLAST)
0001: MSNLLRDFEV EAKNPSLEAR QRWRSSVSIV KNRTRRFRNI RDLDKLADYE NKKHQIQEKI RVAFFVQKAA LHFIDAAARP EYKLTDEVKK AGFSIEADEL
0101: ASMVRKNDTK SLAQKGGVEE LAKKVSVSLS EGIRSSEVPI REKIFGENRY TEKPARSFLM FVWEALHDIT LIILMVCAVV SIGVGVATEG FPRGMYDGTG
0201: ILLSILLVVM VTAISDYKQS LQFRDLDREK KKIIVQVTRD GSRQEISIHD LVVGDVVHLS IGDQVPADGI FISGYNLEID ESSLSGESEP SHVNKEKPFL
0301: LSGTKVQNGS AKMLVTTVGM RTEWGKLMET LVDGGEDETP LQVKLNGVAT IIGKIGLSFA VLTFVVLCIR FVLDKATSGS FTNWSSEDAL TLLDYFAISV
0401: TIIVVAVPEG LPLAVTLSLA FAMKKLMSDR ALVRHLAACE TMGSSTCICT DKTGTLTTNH MVVNKVWICD KVQERQEGSK ESFELELSEE VQSTLLQGIF
0501: QNTGSEVVKD KDGNTQILGS PTERAILEFG LLLGGDFNTQ RKEHKILKIE PFNSDKKKMS VLIALPGGGA RAFCKGASEI VLKMCENVVD SNGESVPLTE
0601: ERITSISDII EGFASEALRT LCLVYKDLDE APSGELPDGG YTMVAVVGIK DPVRPGVREA VQTCQAAGIT VRMVTGDNIS TAKAIAKECG IYTEGGLAIE
0701: GSEFRDLSPH EMRAIIPKIQ VMARSLPLDK HTLVSNLRKI GEVVAVTGDG TNDAPALHEA DIGLAMGIAG TEVAKENADV IIMDDNFKTI VNVARWGRAV
0801: YINIQKFVQF QLTVNVVALI INFVSACITG SAPLTAVQLL WVNMIMDTLG ALALATEPPN EGLMKRAPIA RTASFITKTM WRNIAGQSVY QLIVLGILNF
0901: AGKSLLKLDG PDSTAVLNTV IFNSFVFCQV FNEINSREIE KINVFKGMFN SWVFTWVMTV TVVFQVIIVE FLGAFASTVP LSWQHWLLSI LIGSLNMIVA
1001: VILKCVPVES RHHHDGYDLL PSGPSSSNSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)