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AT2G41140.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26781341 (2016): plasma membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : CDPK-related kinase 1
Curator
Summary (TAIR10)
Encodes CDPK-related kinase 1 (CRK1).
Computational
Description (TAIR10)
CDPK-related kinase 1 (CRK1); FUNCTIONS IN: calcium-dependent protein serine/threonine phosphatase activity, calmodulin-dependent protein kinase activity, kinase activity, calcium ion binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G56760.1); Has 116311 Blast hits to 114570 proteins in 3026 species: Archae - 154; Bacteria - 14640; Metazoa - 43033; Fungi - 12673; Plants - 24419; Viruses - 507; Other Eukaryotes - 20885 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G41140-MONOMERBioGrid:4050EC:2.7.11.1eggNOG:ENOG410XRMJ
eggNOG:KOG0032EMBL:AC004261EMBL:AF153351EMBL:AF435448
EMBL:CP002685EnsemblPlants:AT2G41140EnsemblPlants:AT2G41140.1entrez:818713
Gene3D:1.10.238.10GeneID:818713Genevisible:O80673GO:GO:0004683
GO:GO:0005516GO:GO:0005524GO:GO:0005886GO:GO:0010286
GO:GO:0046777GO:GO:0046872Gramene:AT2G41140.1hmmpanther:PTHR24349
hmmpanther:PTHR24349:SF92HOGENOM:HOG000233030IntAct:O80673InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR011992InterPro:IPR017441
iPTMnet:O80673KEGG:ath:AT2G41140OMA:YKSSPANPaxDb:O80673
Pfam:O80673Pfam:PF00069Pfscan:PS50011PhylomeDB:O80673
PIR:T02105PRIDE:O80673PRO:PR:O80673PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011ProteinModelPortal:O80673Proteomes:UP000006548
RefSeq:NP_181647.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:O80673STRING:3702.AT2G41140.1SUPFAM:SSF47473SUPFAM:SSF56112
TAIR:AT2G41140tair10-symbols:ATCBK3tair10-symbols:ATCRK1tair10-symbols:CRK1
UniGene:At.11329UniProt:O80673
Coordinates (TAIR10) chr2:+:17150492..17153378
Molecular Weight (calculated) 64318.50 Da
IEP (calculated) 8.80
GRAVY (calculated) -0.23
Length 576 amino acids
Sequence (TAIR10)
(BLAST)
001: MGICHGKPVE QQSKSLPVSG ETNEAPTNSQ PPAKSSGFPF YSPSPVPSLF KSSPSVSSSV SSTPLRIFKR PFPPPSPAKH IRAFLARRYG SVKPNEVSIP
101: EGKECEIGLD KSFGFSKQFA SHYEIDGEVG RGHFGYTCSA KGKKGSLKGQ EVAVKVIPKS KMTTAIAIED VSREVKMLRA LTGHKNLVQF YDAFEDDENV
201: YIVMELCKGG ELLDKILQRG GKYSEDDAKK VMVQILSVVA YCHLQGVVHR DLKPENFLFS TKDETSPLKA IDFGLSDYVK PDERLNDIVG SAYYVAPEVL
301: HRTYGTEADM WSIGVIAYIL LCGSRPFWAR TESGIFRAVL KAEPNFEEAP WPSLSPEAVD FVKRLLNKDY RKRLTAAQAL CHPWLVGSHE LKIPSDMIIY
401: KLVKVYIMST SLRKSALAAL AKTLTVPQLA YLREQFTLLG PSKNGYISMQ NYKTAILKSS TDAMKDSRVF DFVHMISCLQ YKKLDFEEFC ASALSVYQLE
501: AMETWEQHAR RAYELFEKDG NRPIMIEELA SELGLGPSVP VHVVLQDWIR HSDGKLSFLG FVRLLHGVSS RTLQKA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)