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AT2G40180.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.947
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphatase 2C5
Curator
Summary (TAIR10)
Encodes PP2C5, a member of the PP2C family phosphatases. PP2C5 acts as a MAPK phosphatase that positively regulates seed germination, stomatal closure and ABA-inducible gene expression.
Computational
Description (TAIR10)
phosphatase 2C5 (PP2C5); CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G07160.1); Has 6862 Blast hits to 6800 proteins in 519 species: Archae - 10; Bacteria - 469; Metazoa - 1632; Fungi - 782; Plants - 2690; Viruses - 9; Other Eukaryotes - 1270 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0631eggNOG:KOG0698EMBL:JF332035EnsemblPlants:AT2G40180
EnsemblPlants:AT2G40180.1entrez:818609ExpressionAtlas:F6LPR7Gene3D:3.60.40.10
GeneID:818609GO:GO:0004722GO:GO:0046872Gramene:AT2G40180.1
hmmpanther:PTHR13832hmmpanther:PTHR13832:SF272InterPro:IPR000222InterPro:IPR001932
InterPro:IPR015655KEGG:ath:AT2G40180OMA:RRGPMEDPANTHER:PTHR13832
PaxDb:F6LPR7Pfam:PF00481Pfam:Q9XEE8Pfscan:PS51746
PhylomeDB:F6LPR7PRIDE:F6LPR7PROSITE:PS01032PROSITE:PS51746
ProteinModelPortal:F6LPR7RefSeq:NP_181547.1scanprosite:PS01032SMART:SM00331
SMART:SM00332SMR:F6LPR7STRING:3702.AT2G40180.1SUPFAM:SSF81606
TAIR:AT2G40180tair10-symbols:ATHPP2C5tair10-symbols:PP2C5UniGene:At.37092
UniProt:F6LPR7UniProt:Q9XEE8
Coordinates (TAIR10) chr2:+:16782522..16784014
Molecular Weight (calculated) 42597.70 Da
IEP (calculated) 6.53
GRAVY (calculated) -0.40
Length 390 amino acids
Sequence (TAIR10)
(BLAST)
001: MQLSKNPIKQ TRNREKNYTD DFTMKRSVIM APESPVFFPP PLVFSPTSVK TPLSSPRSSP PKLTMVACPP RKPKETKTTG SDSETVLKRK RPPMLDLTAA
101: PTVASWCSTT RETAEKGAEV VEAEEDGYYS VYCKRGRRGP MEDRYFAAVD RNDDGGYKNA FFGVFDGHGG SKAAEFAAMN LGNNIEAAMA SARSGEDGCS
201: MESAIREGYI KTDEDFLKEG SRGGACCVTA LISKGELAVS NAGDCRAVMS RGGTAEALTS DHNPSQANEL KRIEALGGYV DCCNGVWRIQ GTLAVSRGIG
301: DRYLKEWVIA EPETRTLRIK PEFEFLILAS DGLWDKVTNQ EAVDVVRPYC VGVENPMTLS ACKKLAELSV KRGSLDDISL IIIQLQNFLP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)