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AT5G52400.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.502
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 715, subfamily A, polypeptide 1
Curator
Summary (TAIR10)
member of CYP715A
Computational
Description (TAIR10)
cytochrome P450, family 715, subfamily A, polypeptide 1 (CYP715A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 735, subfamily A, polypeptide 1 (TAIR:AT5G38450.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2124eggNOG:KOG0157EMBL:CP002688EnsemblPlants:AT5G52400
EnsemblPlants:AT5G52400.1entrez:835316Gene3D:1.10.630.10GeneID:835316
GO:GO:0004497GO:GO:0005506GO:GO:0016021GO:GO:0016705
GO:GO:0020037Gramene:AT5G52400.1hmmpanther:PTHR24282hmmpanther:PTHR24282:SF15
InParanoid:F4KG63InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972
KEGG:ath:AT5G52400OMA:NLRAVQFPaxDb:F4KG63Pfam:PF00067
PRIDE:F4KG63PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086
ProteinModelPortal:F4KG63Proteomes:UP000006548Reactome:R-ATH-193775Reactome:R-ATH-211976
RefSeq:NP_200053.2scanprosite:PS00086SMR:F4KG63STRING:3702.AT5G52400.1
SUPFAM:SSF48264TAIR:AT5G52400tair10-symbols:CYP715A1TMHMM:TMhelix
UniGene:At.29616UniProt:F4KG63
Coordinates (TAIR10) chr5:+:21272949..21275509
Molecular Weight (calculated) 58986.00 Da
IEP (calculated) 9.01
GRAVY (calculated) -0.07
Length 519 amino acids
Sequence (TAIR10)
(BLAST)
001: MEFFEMSRVW YIFFKVFVVV ICLMFLKLFL RCWIWPVRAQ KKLRGNGFVG PAPSFPFGNL NDMKKLKMAS VVVDNSKSST IINHDIHSIA LPHFARWQQE
101: YGKVFVYWLG IEPFVYVADP EFLSVMSKGV LGKSWGKPNV FKKDREPMFG TGLVMVEGDD WTRHRHIITP AFAPLNLKVM TNMMVESVSN MLDRWGIQIN
201: SGNPEFDMES EIIGTAGEII AKTSFGVTGE NGTQVLKNLR AVQFALFNSN RYVGVPFSNI LSYKQTVKAK GLGHEIDGLL LSFINKRKIS LAEGDDQGHD
301: LLGMLLKADQ KGNFTAKELV DECKTFFFAG HETTALALTW TFMLLAIHPE WQDTIREEIR EVIGDSKIEY NKLAGLKKMS WVMNEVLRLY PPAPNAQRQA
401: RNDIEVNGRV IPNGTNIWID VVAMHHDVEL WGDDVNEFKP ERFDGNLHGG CKNKMGYMPF GFGGRMCIGR NLTTMEYKIV LSLVLSRFEI SVSPGYRHSP
501: TYMLSLRPGY GLPLIIRPL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)