AT2G31690.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
encodes a triacylglycerol lipase located in plastoglobuli and involved in the degradation of triacylglycerol. It also has impact on leaf senescence and maintaining the structural integrity of thylakoids. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G05800.1); Has 1212 Blast hits to 1207 proteins in 263 species: Archae - 0; Bacteria - 256; Metazoa - 27; Fungi - 222; Plants - 543; Viruses - 3; Other Eukaryotes - 161 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:13476093..13477547 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 54926.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.03 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.32 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 484 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MALIQNPNMK HAPFLRNRSP QQTLFIPYTL SLPISYQNPK RLKTANSSSS SSLLAPVILN SPVASSSPPP IYCAPKFPCS SGAATVPLSR VWREIQGCNN 101: WKDLIEPLNP LLQQEITRYG NLVSTCYKAF DLDPNSKRYL NCKYGKQTLL KETEIDQPED YQVTKYIYAT PDININISPI QNEMNRRARW VGYVAASSDD 201: SVKRLGRRDI VVTFRGTVTN PEWLANFMSS LTPARFHPHN PRLDVKVESG FLSLYTSDES ESKFGLESCR QQLLSEISRL MNKYKGEEMS ITLAGHSMGS 301: SLAQLLAYDI AELGLNRRIG KGDIPVTVFS FAGPRVGNLE FKKRCEELGV KVLRITNVND PVTKLPGVLF NENFRVLGGF YELPWSCSCY VHVGVELTLD 401: FFDVQNISCV HDLQTYIDLL NQRRTNSRSV DSDEDEDSDN VALEFLKTNG EKMMFLKRQR MMYWSNAVDL LFSFSNHMSY CNIF |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)