AT2G40020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nucleolar histone methyltransferase-related protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nucleolar histone methyltransferase-related protein; CONTAINS InterPro DOMAIN/s: WIYLD domain (InterPro:IPR018848); BEST Arabidopsis thaliana protein match is: Nucleolar histone methyltransferase-related protein (TAIR:AT1G45248.4); Has 5171 Blast hits to 3094 proteins in 302 species: Archae - 25; Bacteria - 259; Metazoa - 1900; Fungi - 494; Plants - 187; Viruses - 172; Other Eukaryotes - 2134 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:16711814..16712853 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 26603.10 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 3.90 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.26 | ||||||||||||||||||||||||||||
| Length | 228 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MREDAARDRM RGFGFHEHVI SESIKELLEV YEDQWFLIED DSYGPLLAIC LEKQEEKEKQ LAEVQANQLP ENHNEEMAEE EQPNQLAVEI HEEEKEQEQD 101: MHIEYGRDQA DELSINSEAV NDPSPAAIHL GEASSDYAQS SVRGVENLHC GWLIDEEETD PEEETDPEEK ETEPEDPKEK ETEPEEDSDG DDDEIIQLTP 201: EPLCEELQEL LREVRGQKRR KKEMRWDK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)