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AT2G39010.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30962257 (2019): plastid
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:23990937 (2013): plasma membrane
  • PMID:23396599 (2013): nucleus nuclear envelope nuclear inner membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:22182420 (2012): endoplasmic reticulum
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21413151 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
  • PMID:18686298 (2008): plant-type vacuole plant-type vacuole membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:16635983 (2006): plasma membrane
  • PMID:15574830 (2004): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : plasma membrane intrinsic protein 2E
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
plasma membrane intrinsic protein 2E (PIP2E); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, response to nematode; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 2;5 (TAIR:AT3G54820.1); Has 10794 Blast hits to 10789 proteins in 2219 species: Archae - 81; Bacteria - 5177; Metazoa - 1475; Fungi - 441; Plants - 2519; Viruses - 2; Other Eukaryotes - 1099 (source: NCBI BLink).
Protein Annotations
BioGrid:3826eggNOG:COG0580eggNOG:KOG0223EMBL:AC005770
EMBL:AY045690EMBL:AY054142EMBL:AY057559EMBL:CP002685
EnsemblPlants:AT2G39010EnsemblPlants:AT2G39010.1entrez:818487Gene3D:1.20.1080.10
GeneID:818487Genevisible:Q9ZV07GO:GO:0005773GO:GO:0005886
GO:GO:0006833GO:GO:0009506GO:GO:0009624GO:GO:0015250
GO:GO:0015254GO:GO:0015793GO:GO:0016020GO:GO:0016021
GO:GO:0034220Gramene:AT2G39010.1hmmpanther:PTHR19139hmmpanther:PTHR19139:SF158
HOGENOM:HOG000288286InParanoid:Q9ZV07IntAct:Q9ZV07InterPro:IPR000425
InterPro:IPR022357InterPro:IPR023271iPTMnet:Q9ZV07KEGG:ath:AT2G39010
KO:K09872OMA:AQQETRGPANTHER:PTHR19139PaxDb:Q9ZV07
Pfam:PF00230Pfam:Q9ZV07PhylomeDB:Q9ZV07PIR:A84812
PRIDE:Q9ZV07PRINTS:PR00783PRO:PR:Q9ZV07PROSITE:PS00221
ProteinModelPortal:Q9ZV07Proteomes:UP000006548Reactome:R-ATH-432047RefSeq:NP_181434.1
scanprosite:PS00221SMR:Q9ZV07STRING:3702.AT2G39010.1SUPFAM:SSF81338
TAIR:AT2G39010tair10-symbols:PIP2;6tair10-symbols:PIP2ETCDB:1.A.8.11.5
TIGRfam:TIGR00861TIGRFAMs:TIGR00861TMHMM:TMhelixUniGene:At.13247
UniProt:Q9ZV07
Coordinates (TAIR10) chr2:+:16291564..16293746
Molecular Weight (calculated) 31051.70 Da
IEP (calculated) 8.29
GRAVY (calculated) 0.46
Length 289 amino acids
Sequence (TAIR10)
(BLAST)
001: MTKDELTEEE SLSGKDYLDP PPVKTFEVRE LKKWSFYRAV IAEFIATLLF LYVTVLTVIG FKSQTDINAG GGACASVGLL GISWAFGGMI FILVYCTAGI
101: SGGHINPAVT FGLFLASKVS LVRAVSYMVA QCLGATCGVG LVKVFQSTYY NRYGGGANML SDGYNVGVGV GAEIIGTFVL VYTVFSATDP KRNARDSHIP
201: VLAPLPIGFS VFMVHLATIP ITGTGINPAR SFGAAVIYNN QKAWDDQWIF WVGPFVGAAI AAFYHQFVLR AGAMKAYGSV RSQLHELHA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)