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AT2G38660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Amino acid dehydrogenase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Amino acid dehydrogenase family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: folic acid and derivative biosynthetic process, metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain (InterPro:IPR020631), Tetrahydrofolate dehydrogenase/cyclohydrolase (InterPro:IPR000672), NAD(P)-binding domain (InterPro:IPR016040), Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site (InterPro:IPR020867), Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (InterPro:IPR020630); BEST Arabidopsis thaliana protein match is: Amino acid dehydrogenase family protein (TAIR:AT4G00620.1); Has 9936 Blast hits to 9931 proteins in 2768 species: Archae - 105; Bacteria - 5635; Metazoa - 391; Fungi - 308; Plants - 157; Viruses - 0; Other Eukaryotes - 3340 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G38660-MONOMERBioCyc:ARA:GQT-951-MONOMERBioCyc:ARA:GQT-952-MONOMERBioGrid:3790
EC:1.5.1.5EC:3.5.4.9eggNOG:COG0190eggNOG:KOG0089
EMBL:AC005499EMBL:AK319160EMBL:BT004325EMBL:BT030098
EMBL:CP002685EnsemblPlants:AT2G38660EnsemblPlants:AT2G38660.1EnsemblPlants:AT2G38660.2
EnsemblPlants:AT2G38660.3EnsemblPlants:AT2G38660.4entrez:818448ExpressionAtlas:A2RVV7
Gene3D:3.40.50.720GeneID:818448Genevisible:A2RVV7GO:GO:0004477
GO:GO:0004488GO:GO:0005739GO:GO:0009396GO:GO:0009853
GO:GO:0035999gramene_pathway:6.3.4.3gramene_pathway:PWY-2161gramene_pathway:PWY-2201
gramene_pathway:PWY-3841HAMAP:MF_01576hmmpanther:PTHR10025hmmpanther:PTHR10025:SF43
HOGENOM:HOG000218242InParanoid:A2RVV7IntAct:A2RVV7InterPro:IPR000672
InterPro:IPR016040InterPro:IPR020630InterPro:IPR020631InterPro:IPR020867
KEGG:00670+1.5.1.5+3.5.4.9KEGG:00720+1.5.1.5+3.5.4.9KEGG:ath:AT2G38660OMA:AVAWILE
PaxDb:A2RVV7Pfam:A2RVV7Pfam:PF00763Pfam:PF02882
PhylomeDB:A2RVV7PIR:G84807PRIDE:A2RVV7PRINTS:PR00085
PRO:PR:A2RVV7PROSITE:PS00767ProteinModelPortal:A2RVV7Proteomes:UP000006548
RefSeq:NP_001031508.1RefSeq:NP_001118472.1RefSeq:NP_001189703.1RefSeq:NP_181400.2
scanprosite:PS00767SMR:A2RVV7STRING:3702.AT2G38660.1SUPFAM:SSF51735
SUPFAM:SSF53223TAIR:AT2G38660UniGene:At.37265UniPathway:UPA00193
UniProt:A2RVV7
Coordinates (TAIR10) chr2:+:16166392..16168194
Molecular Weight (calculated) 38050.70 Da
IEP (calculated) 6.93
GRAVY (calculated) 0.16
Length 352 amino acids
Sequence (TAIR10)
(BLAST)
001: MLMIARKALA SAHTKAFRLA TRDVHCFSSI LVSPPLVSLD LPENWIPYSD PPPPVSFETE QKTVVIDGNV IAEEIRTKII SEVGKMKKAV GKVPGLAVVL
101: VGEQRDSQTY VRNKIKACEE TGIKSVLAEL PEDCTEGQII SVLRKFNEDT SIHGILVQLP LPQHLNESKI LNMVRLEKDV DGFHPLNVGN LAMRGREPLF
201: VSCTPKGCVE LLIRTGVEIA GKNAVVIGRS NIVGLPMSLL LQRHDATVST VHAFTKDPEH ITRKADIVIA AAGIPNLVRG SWLKPGAVVI DVGTTPVEDS
301: SCEFGYRLVG DVCYEEALGV ASAITPVPGG VGPMTITMLL CNTLEAAKRI FL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)