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AT2G34830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : WRKY DNA-binding protein 35
Curator
Summary (TAIR10)
member of WRKY Transcription Factor; Group II-e
Computational
Description (TAIR10)
WRKY DNA-binding protein 35 (WRKY35); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY group Iie (InterPro:IPR017412); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 14 (TAIR:AT1G30650.1); Has 5047 Blast hits to 3028 proteins in 237 species: Archae - 0; Bacteria - 12; Metazoa - 64; Fungi - 63; Plants - 3289; Viruses - 0; Other Eukaryotes - 1619 (source: NCBI BLink).
Protein Annotations
BioGrid:3394eggNOG:ENOG410IHFJeggNOG:ENOG410YD4AEMBL:AC004238
EMBL:AF404863EMBL:BT002781EMBL:CP002685EnsemblPlants:AT2G34830
EnsemblPlants:AT2G34830.1entrez:818048ExpressionAtlas:O64747ExpressionAtlas:Q058H9
Gene3D:2.20.25.80GeneID:818048Genevisible:O64747GO:GO:0003700
GO:GO:0005634GO:GO:0006351GO:GO:0009555GO:GO:0009793
GO:GO:0043565hmmpanther:PTHR32096hmmpanther:PTHR32096:SF18HOGENOM:HOG000083783
InParanoid:O64747InterPro:IPR003657KEGG:ath:AT2G34830MINT:MINT-8069017
OMA:FEDDHIKPaxDb:O64747Pfam:O64747Pfam:PF03106
Pfscan:PS50811PhylomeDB:O64747PIR:T00465PRO:PR:O64747
PROSITE:PS50811ProteinModelPortal:O64747Proteomes:UP000006548RefSeq:NP_181029.1
SMART:SM00774SMR:O64747STRING:3702.AT2G34830.1SUPFAM:0050605
SUPFAM:SSF118290TAIR:AT2G34830tair10-symbols:AtWRKY35tair10-symbols:MEE24
tair10-symbols:WRKY35UniGene:At.19590UniProt:O64747UniProt:Q058H9
Coordinates (TAIR10) chr2:-:14693839..14696378
Molecular Weight (calculated) 46282.20 Da
IEP (calculated) 6.01
GRAVY (calculated) -0.68
Length 427 amino acids
Sequence (TAIR10)
(BLAST)
001: MDNFQGDLTD VVRGIGSGHV SPSPGPPEGP SPSSMSPPPT SDLHVEFPSA ATSASCLANP FGDPFVSMKD PLIHLPASYI SGAGDNKSNK SFAIFPKIFE
101: DDHIKSQCSV FPRIKISQSN NIHDASTCNS PAITVSSAAV AASPWGMINV NTTNSPRNCL LVDNNNNTSS CSQVQISSSP RNLGIKRRKS QAKKVVCIPA
201: PAAMNSRSSG EVVPSDLWAW RKYGQKPIKG SPYPRGYYRC SSSKGCSARK QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSSSS SSLNPSSKSS
301: TAAATTSPSS RVFQNNSSKD EPNNSNLPSS STHPPFDAAA IKEENVEERQ EKMEFDYNDV ENTYRPELLQ EFQHQPEDFF ADLDELEGDS LTMLLSHSSG
401: GGNMENKTTI PDVFSDFFDD DESSRSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)