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AT2G34780.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : maternal effect embryo arrest 22
Curator
Summary (TAIR10)
Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway.
Computational
Description (TAIR10)
MATERNAL EFFECT EMBRYO ARREST 22 (MEE22); Has 114610 Blast hits to 64620 proteins in 2807 species: Archae - 1395; Bacteria - 19220; Metazoa - 50238; Fungi - 9135; Plants - 5590; Viruses - 506; Other Eukaryotes - 28526 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKGYeggNOG:ENOG410YFEBEMBL:CP002685EnsemblPlants:AT2G34780
EnsemblPlants:AT2G34780.1entrez:818043ExpressionAtlas:F4IIV5GeneID:818043
GO:GO:0009793GO:GO:0009933GO:GO:0010074GO:GO:0032876
Gramene:AT2G34780.1hmmpanther:PTHR35480hmmpanther:PTHR35480:SF1InParanoid:F4IIV5
iPTMnet:F4IIV5ncoils:CoilOMA:NISCSTKPaxDb:F4IIV5
PRIDE:F4IIV5ProteinModelPortal:F4IIV5Proteomes:UP000006548RefSeq:NP_850237.1
STRING:3702.AT2G34780.1TAIR:AT2G34780tair10-symbols:EMB1611tair10-symbols:MEE22
UniGene:At.43525UniGene:At.66396UniProt:F4IIV5
Coordinates (TAIR10) chr2:+:14668653..14673607
Molecular Weight (calculated) 144354.00 Da
IEP (calculated) 8.16
GRAVY (calculated) -0.40
Length 1297 amino acids
Sequence (TAIR10)
(BLAST)
0001: MATTNAPPEL ASGNPCCLAW QGKYIGMKKR RDAFKEGVTL LQKAIENVNA EKSNLERKFG EMATDGDTKE NGSTVKASLE KEISRLKFEI VSLQQKLERN
0101: LKEKSEETKL LQDQASGREK EINELRDLLK KETLRADSSE EEREHAFKEL NKAKALIVKD EEIEQDIPEV KREISLVKNL LASERQKTES ERKKAESEKK
0201: KADKYLSELE VLRNSAHKTS SDLLTLTSNL ETVKKQLELE KQKTLKEKKR ADMESAKARD QMKLAEDVSK KFEIVRARNE ELKKEMESQT ASSQVKFAEN
0301: SEKLEEKIRL LEMNKKTAMD WKSRTDDLTQ QLQEAQLVAE GLKKQVHELS LSQKSIKTHS ISPQKVRDLE KAEMRLLKKK MKFERNCAKH SQTVAKFEKF
0401: RREFQCEELG RLKLEFGSLT NRMNLLDEYF STDVEGTAGL GKATGCRKLL TLNSQKNRNG EKHSDARCKL VASSGYQEQA CKLSAHLISK SGRGVSESVS
0501: GTISQLESPT GGSRKLPSSG VISSATSFSD GQLLASQGRE QFSVTTSAEI AKDKPNIQPT KSSMLQKISD TSKNGNLCLV AENYLQRCQR DIHENSRKRK
0601: RMLEAVVSHK HLASGDKKKN LPIGEKMGTL QSMIVGTGSR PSEKEETLVP PDRQGGSSAI DITVSKKRRV SCKKKIIVQN SLEFNQSGKT PGNIAGKTTC
0701: LSTATGHDVK TLFSEDFAAT DYMKLLELDN LEEENYYQMA RESLLSPDLP QVDFLGCEIM NEDKNPARAI DLAASNSMYL RETILSSESP SLNTQNISVT
0801: VEMPPMLKPL HGHLLKHFIV FSNIEDQNSI IIIIHATNNC LQRCPSVTKE QWAVPAILSS LKMEENLLAQ ERACVFLSLL LHNFSMVHTT KTGNTLNVDS
0901: FSCLDSFSKH IRGVMADTEA GVMLSGFSEE LLCLLQDLLS GQRVLFSVKS SETCESDLSI PVTLNGENVA LVNKIALTDQ LVAGSAILAA ICTALDRIGY
1001: ICEASFEILH KYSHEKTSVL LTILHVFAYI AGEKMVLSSE HGISIAVLKY IVMFLENKHF GTVEGSSRLH PGKNKCPFSD RSSSLEAMAS KLMEILQEFT
1101: ESNTLHKSLT GSLGSSHLEK TEFRPAHKDF QCVLTRDQSI NLCDILSLVE LIACYTAWDW TSANIVAPLL KMLGMPLPMN LSVAIVSLLG QLSSIGVDAG
1201: GYENEGISNL RVKLSAFLQC ETTLKAGFAV QIATVSSLLK TLQLKFPIDF QDKTTMIPGS GDQSLSGSVN VVTKWLSLLS KEQRVFAFEF LQTNVVR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)