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AT2G34770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : fatty acid hydroxylase 1
Curator
Summary (TAIR10)
encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.
Computational
Description (TAIR10)
fatty acid hydroxylase 1 (FAH1); FUNCTIONS IN: fatty acid alpha-hydroxylase activity, catalytic activity; INVOLVED IN: very long-chain fatty acid metabolic process, negative regulation of programmed cell death; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: fatty acid hydroxylase 2 (TAIR:AT4G20870.1); Has 784 Blast hits to 784 proteins in 354 species: Archae - 0; Bacteria - 388; Metazoa - 105; Fungi - 140; Plants - 78; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G34770-MONOMERBioCyc:MetaCyc:AT2G34770-MONOMERBioGrid:3388EC:1.14.18.7
eggNOG:COG3000eggNOG:KOG0539EMBL:AC003096EMBL:AF021804
EMBL:AY050326EMBL:BT000482EMBL:CP002685EnsemblPlants:AT2G34770
EnsemblPlants:AT2G34770.1entrez:818042GeneID:818042Genevisible:O48916
GO:GO:0000038GO:GO:0005506GO:GO:0005783GO:GO:0005789
GO:GO:0006633GO:GO:0016021GO:GO:0016491Gramene:AT2G34770.1
gramene_pathway:1.14.-.-gramene_pathway:2.7.7.-gramene_pathway:PWY-5129hmmpanther:PTHR12863
hmmpanther:PTHR12863:SF3HOGENOM:HOG000023981InParanoid:O48916IntAct:O48916
InterPro:IPR006694KEGG:ath:AT2G34770KO:K19706OMA:KWWAVPT
PaxDb:O48916Pfam:O48916Pfam:PF04116PhylomeDB:O48916
PIR:T01359PRIDE:O48916PRO:PR:O48916Proteomes:UP000006548
Reactome:R-ATH-1660661RefSeq:NP_181023.1SMR:O48916STRING:3702.AT2G34770.1
TAIR:AT2G34770tair10-symbols:ATFAH1tair10-symbols:FAH1TMHMM:TMhelix
UniGene:At.10506UniProt:O48916
Coordinates (TAIR10) chr2:+:14666776..14668061
Molecular Weight (calculated) 27423.50 Da
IEP (calculated) 9.10
GRAVY (calculated) 0.11
Length 237 amino acids
Sequence (TAIR10)
(BLAST)
001: MVAQGFTVDL KKPLVFQVGH LGEDYEEWVH QPIATKEGPR FFQSDFWEFL TLTVWWAVPV IWLPVVVWCI SRSVSMGCSL PEIVPIVVMG IFIWTFFEYV
101: LHRFVFHIKT KSYWGNTAHY LIHGCHHKHP MDHLRLVFPP TATAILCFPF WNIAKAISTP STAPALFGGG MLGYVMYDVT HYYLHHAQPT RPVTKNLKKY
201: HLNHHFRIQD KGFGITSSLW DIVFGTLPTT KAPRKEQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)