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AT3G58620.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.990
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : tetratricopetide-repeat thioredoxin-like 4
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
tetratricopetide-repeat thioredoxin-like 4 (TTL4); FUNCTIONS IN: binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Thioredoxin fold (InterPro:IPR012335), Tetratricopeptide-like helical (InterPro:IPR011990), Thioredoxin domain (InterPro:IPR013766), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Thioredoxin-like fold (InterPro:IPR012336), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: tetratricopetide-repeat thioredoxin-like 3 (TAIR:AT2G42580.1); Has 21785 Blast hits to 12872 proteins in 1130 species: Archae - 748; Bacteria - 6255; Metazoa - 5785; Fungi - 2015; Plants - 2355; Viruses - 3; Other Eukaryotes - 4624 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG41108CDeggNOG:KOG0907eggNOG:KOG1124EMBL:AL137082
EMBL:BT003919EMBL:BT005006EMBL:CP002686EnsemblPlants:AT3G58620
EnsemblPlants:AT3G58620.1entrez:825031Gene3D:1.25.40.10Gene3D:3.40.30.10
GeneID:825031Genevisible:Q84JR9GO:GO:0005623GO:GO:0006970
GO:GO:0045454Gramene:AT3G58620.1hmmpanther:PTHR22904hmmpanther:PTHR22904:SF297
HOGENOM:HOG000237654InParanoid:Q84JR9InterPro:IPR001440InterPro:IPR011990
InterPro:IPR012336InterPro:IPR013026InterPro:IPR013766InterPro:IPR019734
iPTMnet:Q84JR9KEGG:ath:AT3G58620OMA:ENPAYRSPaxDb:Q84JR9
Pfam:PF00085Pfam:PF00515Pfam:PF13174Pfam:PF13414
Pfam:Q84JR9Pfscan:PS50005Pfscan:PS50293PhylomeDB:Q84JR9
PIR:T45682PRIDE:Q84JR9PRO:PR:Q84JR9PROSITE:PS50005
PROSITE:PS50293ProteinModelPortal:Q84JR9Proteomes:UP000006548RefSeq:NP_191421.2
SMART:SM00028SMR:Q84JR9STRING:3702.AT3G58620.1SUPFAM:SSF48452
SUPFAM:SSF52833TAIR:AT3G58620tair10-symbols:TTL4UniGene:At.34711
UniProt:Q84JR9
Coordinates (TAIR10) chr3:+:21680397..21682959
Molecular Weight (calculated) 74390.90 Da
IEP (calculated) 9.18
GRAVY (calculated) -0.43
Length 682 amino acids
Sequence (TAIR10)
(BLAST)
001: MSHYRRHSLE PSITSKFRDS LSFQRDDDVI NKPDFRELDF GSPLRPRGSS SAAATPAASG SSSSSSGSAS GKPAVTSQFA RRSHSGELSG LSQTSPVKPG
101: SVNRNLKPGH RRSASAGTPL IYSGLGFSPV NNNNNSSRGG GSGATSPNPG VLPTGNICPS GRILKTGMAT RASVRPETLC TGTANYGHGN IIRTGGKVSH
201: ATKAAAEMSD SEEVKKAGNV MYRKGNYAEA LALYDRAISL SPENPAYRSN RAAALAASGR LEEAVKECLE AVRCDPSYAR AHQRLASLYL RLGEAENARR
301: HLCVSGQCPD QADLQRLQTL EKHLRLCTEA RKIGDWRTVI SEIDAAIANG ADSSPQLVAC KAEAFLRLHQ IKDSDLCISS IPRLDHHHTQ PPEKLFGIVC
401: DAYVLCVQAQ VDMALGRFEN AIVKVERAMT IDHSNSPEVV SVLNNVKNVA KARTRGNELF SSGRYSEASV AYGDGLKLDA FNSVLYCNRA ACWFKLGMWE
501: KSVDDCNQAL RIQPSYTKAL LRRAASYGKL GRWEDAVRDY EVLRKELPGD SEVAESLQRA RNALSNKSEE PKYLGFNNEV EEVSTLDKFK TATSLPGISV
601: FHFKSSSNRQ SEAISPFVNT LCLRYPLVHF FKVDVEESLA LAKAESIKKI PTFKIYKKGE KVKEMVCPSH QLLEDSVTHF LL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)