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AT2G31840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Thioredoxin superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Thioredoxin superfamily protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28590.1); Has 792 Blast hits to 656 proteins in 115 species: Archae - 0; Bacteria - 18; Metazoa - 243; Fungi - 77; Plants - 88; Viruses - 24; Other Eukaryotes - 342 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IRF9eggNOG:ENOG410YAAYEMBL:AC006533EMBL:CP002685
EnsemblPlants:AT2G31840EnsemblPlants:AT2G31840.1entrez:817741Gene3D:3.40.30.10
GeneID:817741GO:GO:0006355GO:GO:0009570GO:GO:0009658
Gramene:AT2G31840.1hmmpanther:PTHR34669hmmpanther:PTHR34669:SF1InterPro:IPR012336
KEGG:ath:AT2G31840OMA:MAFFYYGPhylomeDB:Q9SKB6PIR:G84725
Proteomes:UP000006548RefSeq:NP_180743.1STRING:3702.AT2G31840.1SUPFAM:SSF52833
TAIR:AT2G31840UniGene:At.3459UniGene:At.66404UniProt:Q9SKB6
Coordinates (TAIR10) chr2:-:13538003..13539602
Molecular Weight (calculated) 40541.50 Da
IEP (calculated) 4.51
GRAVY (calculated) -0.72
Length 350 amino acids
Sequence (TAIR10)
(BLAST)
001: MILPFSTQFT CPVQDNGFSP SSLLSHCKRD RFEVTSLRYD SFGSVKTASS SKWNVMRSRR NVKAFGLVDK LGKKVWRKKE EDSDSEDEED EVKEETFGGK
101: EASLDDPVER REWRKTIREV IDKHPDIEED EEIDMVEKRR KMQKLLADYP LVVNEEDPNW PEDADGWGFS FNQFFNKITI KNEKKEEEDD DEDSEGDDSE
201: KEIVWQDDNY IRPIKDLTTA EWEEAVFKDI SPLMVLVHNR YKRPKENEKF REELEKAIQV IWNCGLPSPR CVAVDAVVET DLVSALKVSV FPEIIFTKAG
301: KILYREKGIR TADELSKIMA FFYYGAAKPP CLNGVVNSQE QIPLVDVSVN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)