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AT2G27820.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : prephenate dehydratase 1
Curator
Summary (TAIR10)
Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identified in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].
Computational
Description (TAIR10)
prephenate dehydratase 1 (PD1); CONTAINS InterPro DOMAIN/s: Prephenate dehydratase (InterPro:IPR001086), Prephenate dehydratase, conserved site (InterPro:IPR018528); BEST Arabidopsis thaliana protein match is: arogenate dehydratase 6 (TAIR:AT1G08250.1); Has 7147 Blast hits to 7145 proteins in 2247 species: Archae - 179; Bacteria - 4014; Metazoa - 4; Fungi - 119; Plants - 265; Viruses - 0; Other Eukaryotes - 2566 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G27820-MONOMERBioGrid:2679BRENDA:4.2.1.51BRENDA:4.2.1.91
EC:4.2.1.91eggNOG:COG0077eggNOG:KOG2797EMBL:AC005824
EMBL:AK229426EMBL:AY087695EMBL:BT025989EMBL:CP002685
EMBL:DQ411464EnsemblPlants:AT2G27820EnsemblPlants:AT2G27820.1entrez:817329
GeneID:817329Genevisible:Q9ZUY3GO:GO:0004664GO:GO:0005829
GO:GO:0006571GO:GO:0009094GO:GO:0009507GO:GO:0009570
GO:GO:0010244GO:GO:0016597GO:GO:0047769GO:GO:0080167
Gramene:AT2G27820.1gramene_pathway:4.2.1.91gramene_pathway:PWY-3462hmmpanther:PTHR21022
hmmpanther:PTHR21022:SF5HOGENOM:HOG000018970InParanoid:Q9ZUY3InterPro:IPR001086
InterPro:IPR002912InterPro:IPR018528iPTMnet:Q9ZUY3KEGG:00400+4.2.1.51
KEGG:ath:AT2G27820KO:K05359OMA:GSRADWQPaxDb:Q9ZUY3
Pfam:PF00800Pfam:Q9ZUY3Pfscan:PS51171Pfscan:PS51671
PhylomeDB:Q9ZUY3PIR:D84677PRIDE:Q9ZUY3PRO:PR:Q9ZUY3
PROSITE:PS00857PROSITE:PS00858PROSITE:PS51171PROSITE:PS51671
ProteinModelPortal:Q9ZUY3Proteomes:UP000006548RefSeq:NP_180350.1SABIO-RK:Q9ZUY3
scanprosite:PS00857scanprosite:PS00858SMR:Q9ZUY3STRING:3702.AT2G27820.1
SUPFAM:SSF53850SUPFAM:SSF55021TAIR:AT2G27820tair10-symbols:ADT3
tair10-symbols:PD1UniGene:At.38711UniPathway:UPA00121UniProt:Q9ZUY3
Coordinates (TAIR10) chr2:+:11856808..11858082
Molecular Weight (calculated) 46104.30 Da
IEP (calculated) 6.95
GRAVY (calculated) -0.15
Length 424 amino acids
Sequence (TAIR10)
(BLAST)
001: MRTLLPSHTP ATVTTAARRR HVIHCAGKRS DSFSINSSSS DWQSSCAILS SKVNSQEQSE SLSSNSNGSS SYHVSAVNGH NNGAGVSDLN LVPFNNNQSI
101: QSKKPLSISD LSPAPMHGSN LRVAYQGVPG AYSEAAAGKA YPNCQAIPCD QFEVAFQAVE LWIADRAVLP VENSLGGSIH RNYDLLLRHR LHIVGEVQLP
201: VHHCLIALPG VRKEFLTRVI SHPQGLAQCE HTLTKLGLNV AREAVDDTAG AAEFIAANNI RDTAAIASAR AAEIYGLEIL EDGIQDDASN VTRFVMLARE
301: PIIPRTDRPF KTSIVFAHEK GTCVLFKVLS AFAFRNISLT KIESRPNHNV PIRLVDEANV GTAKHFEYMF YIDFEASMAE SRAQNALSEV QEFTSFLRVL
401: GSYPMDMTSW SPSSSSSSSS TFSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)