AT2G24690.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 ASURE: nucleus What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Transcriptional factor B3 family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Transcriptional factor B3 family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: DNA binding;DNA binding;sequence-specific DNA binding transcription factors (TAIR:AT2G24650.1); Has 627 Blast hits to 195 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 10; Plants - 615; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10499551..10503110 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 87161.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.71 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.68 | ||||||||||||||||||||||||||||||||||||
| Length | 777 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANSLILGSP INPEGEMMIQ FSNNHDNNIE FQRRKKMKKN NPETETDSSS DLSCFVAQTG ALLHLPQGFT SSNGSNRECR KSPRPIISSY SSSEKQFVTF 101: TLAPVDGRHC RLRLPMQFTR ENGINKPGKI YLVGKDGSKW LANLLLENNR GRMTLGDGWK SFVKANGLKT GDTYTFKLLW EDTTPVLSLC FEEYNTDTRV 201: GEESSKESLP AEPSSQEKIV KDDNNKDESS TWKREGNHLR CKDSTSPSQN CTLTVTITPD SLEHGRLRLP LQFMTENSMN KPGEITLLGT DGAKWMASLL 301: LEKKGRMSLG KGWKDFAKAN GLKTGDSITL EPIWEDRTPV LSIKSSSGKG QSEFSKESLS IKPSSGNMTK KVENNREASR KYPPRSRESS SAIQNQFMAL 401: TPLRDIVSQV AHDLSIGEVI NFRHKGDNML RVSDLGSNCC GVQDLLAPSS NYDHDNISNI SMKINPHIRK EAVTFSSYDG YAHDNFEPPS KKKVKKNNPE 501: MEADYLSDHS CFVSHVTTSS LHTNALSLEV KESLPIEPSI KPNISEDDNN KEEDIIEENS SFEREKNHWI CIDSISSSQN RFLTLTITPD SLKHGRLRLP 601: LQFMIENSMN KPGEITVLGK DGAKWLVSLL LERRGRMSLD ASSGQETREA EKNREESSSL WELEKRTYCP RKRDSSSDVK NRFLTLTLAP EDVKDGNLHL 701: PCQFMRINGI NKPGQITLLG RGGMKWFAYL LSGDGTVVVG NGWKGFCEAN GVMLGETFVL EFIPKDDTNH VFKFYTK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)