AT2G14860.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
|
||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, peroxisomal membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Mpv17/PMP22 (InterPro:IPR007248); BEST Arabidopsis thaliana protein match is: Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR:AT4G33905.1); Has 1452 Blast hits to 1452 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 577; Fungi - 386; Plants - 314; Viruses - 11; Other Eukaryotes - 164 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr2:-:6387820..6389563 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 28277.40 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.67 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.08 | ||||||||||||||||||||||||||||||||
| Length | 252 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSRALFRNVA VDTARLIRRN AAASTDQYGK TGVAQSRPYF RSRQLLERAK ETGVSPSPSL GFSSSSSPSR IGFVGWYLGM VKSHPVVTKS VTSSLIYIAA 101: DLSSQTIAKT SSESYDLVRT ARMGGYGLFV LGPTLHYWFN FMSRLFPKQD LITTFKKMAM GQTIYGPIMT VIFFSLNASL QGERGSVILA RLKRDLLPAL 201: FNGVMYWPLC DFITFRFFPV HLQPLVSNSF SYVWTIYMTY MANREKPVAI ST |
||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)