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AT2G13810.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AGD2-like defense response protein 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AGD2-like defense response protein 1 (ALD1); FUNCTIONS IN: transferase activity, transferring nitrogenous groups, pyridoxal phosphate binding, transaminase activity, catalytic activity; INVOLVED IN: asparagine catabolic process, biosynthetic process, glutamate catabolic process to oxaloacetate, aspartate transamidation; LOCATED IN: chloroplast; EXPRESSED IN: sepal, root, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: LL-diaminopimelate aminotransferase, plant-related (InterPro:IPR019942), Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT4G33680.1); Has 32741 Blast hits to 32741 proteins in 2900 species: Archae - 975; Bacteria - 23252; Metazoa - 372; Fungi - 435; Plants - 591; Viruses - 0; Other Eukaryotes - 7116 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G13810-MONOMERBRENDA:2.6.1.83EC:2.6.1.-eggNOG:COG0436
eggNOG:KOG0257EMBL:AC006218EMBL:AC006436EMBL:AY057526
EMBL:AY143898EMBL:AY518702EMBL:CP002685EnsemblPlants:AT2G13810
EnsemblPlants:AT2G13810.1entrez:815864Gene3D:3.40.640.10Gene3D:3.90.1150.10
GeneID:815864Genevisible:Q9ZQI7GO:GO:0008483GO:GO:0009089
GO:GO:0009862GO:GO:0010150GO:GO:0010285GO:GO:0030170
GO:GO:0042742Gramene:AT2G13810.1hmmpanther:PTHR11751hmmpanther:PTHR11751:SF376
HOGENOM:HOG000223061InParanoid:Q9ZQI7InterPro:IPR004839InterPro:IPR015421
InterPro:IPR015422InterPro:IPR015424InterPro:IPR019942KEGG:00300+2.6.1.83
KEGG:ath:AT2G13810KO:K10206OMA:QSAIHRRPANTHER:PTHR11751:SF376
PaxDb:Q9ZQI7PDB:4FL0PDBsum:4FL0Pfam:PF00155
Pfam:Q9ZQI7PhylomeDB:Q9ZQI7PIR:A84511PRIDE:Q9ZQI7
PRO:PR:Q9ZQI7ProteinModelPortal:Q9ZQI7Proteomes:UP000006548RefSeq:NP_565359.1
SABIO-RK:Q9ZQI7SMR:Q9ZQI7STRING:3702.AT2G13810.1SUPFAM:SSF53383
TAIR:AT2G13810tair10-symbols:ALD1TIGRfam:TIGR03542TIGRFAMs:TIGR03542
UniGene:At.26317unipathway:UPA00034UniProt:Q9ZQI7
Coordinates (TAIR10) chr2:+:5768489..5772138
Molecular Weight (calculated) 50580.10 Da
IEP (calculated) 8.53
GRAVY (calculated) -0.22
Length 456 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSLMFFSSA SPLCSSPSKI PKASLDFEMK KLGGSTKLVR NVNLEKLKNN YLFPEINRRE LEHIEKHPNV QLISLGTGDT TEPIPEQITS HMSNFAHGLS
101: TVEGYRGYGL EQGNKTLRKA IAETFYRDLH VKSNEVFVSD GAQSDISRLQ LLLGSNVTIA VQDPTFPAYI DSSVIIGQTG HFHEKTKKYQ NVVYMPCGPN
201: NSFFPDLAMT PRTDVIFFCS PNNPTGYVAS RKQLHQLVDF AKTNGSIIIF DSAYAAFIED GSPRSIYEIP GAREVAIEVS SFSKFAGFTG VRLGWSIIPD
301: ELLYSNGFPI INDFHRIVTT SFNGASNIAQ AGGLACLSSG GLKEIRSVNN YYKENRKILM DTLVSLGLKV YGGVNAPYLW VHFKGSKSWD VFNEILENTH
401: IITVPGSGFG PGGEEYLRIS GFGRRDHIVE ASKRLQNFFN TRTKHFTYLS STSNTN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)