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AT2G13360.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31186290 (2019): cytosol None
  • PMID:30962257 (2019): plastid
  • PMID:30865669 (2019): plastid
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25641898 (2015): plasma membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21531424 (2011): plastid
  • PMID:21311031 (2011): plastid
  • PMID:21311031 (2011): mitochondrion
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:17951448 (2007): peroxisome
  • PMID:15028209 (2004): plastid
  • PMID:14506206 (2003): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alanine:glyoxylate aminotransferase
Curator
Summary (TAIR10)
Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.
Computational
Description (TAIR10)
alanine:glyoxylate aminotransferase (AGT); FUNCTIONS IN: serine-pyruvate transaminase activity, serine-glyoxylate transaminase activity, alanine-glyoxylate transaminase activity; INVOLVED IN: photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class V/Cysteine desulfurase (InterPro:IPR000192), Aminotransferase class-V pyridoxal-phosphate binding site (InterPro:IPR020578), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); Has 6407 Blast hits to 6405 proteins in 1610 species: Archae - 309; Bacteria - 3905; Metazoa - 186; Fungi - 125; Plants - 148; Viruses - 0; Other Eukaryotes - 1734 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-508-MONOMERBioCyc:MetaCyc:AT2G13360-MONOMERBioGrid:1183BRENDA:2.6.1.44
BRENDA:2.6.1.45EC:2.6.1.-EC:2.6.1.44EC:2.6.1.45
EC:2.6.1.51eggNOG:COG0075eggNOG:KOG2862EMBL:AB048945
EMBL:AC007209EMBL:AF063901EMBL:AK221418EMBL:AY096498
EMBL:AY114010EMBL:CP002685EnsemblPlants:AT2G13360EnsemblPlants:AT2G13360.1
EnsemblPlants:AT2G13360.2entrez:815822Gene3D:3.40.640.10Gene3D:3.90.1150.10
GeneID:815822Genevisible:Q56YA5GO:GO:0004760GO:GO:0005777
GO:GO:0005886GO:GO:0008453GO:GO:0009507GO:GO:0009570
GO:GO:0009853GO:GO:0016020GO:GO:0048046GO:GO:0050281
Gramene:AT2G13360.1Gramene:AT2G13360.2gramene_pathway:2.6.1.45gramene_pathway:GLYSYN2-PWY
gramene_pathway:PWY-181hmmpanther:PTHR21152hmmpanther:PTHR21152:SF21HOGENOM:HOG000171814
InParanoid:Q56YA5IntAct:Q56YA5InterPro:IPR000192InterPro:IPR015421
InterPro:IPR015422InterPro:IPR015424InterPro:IPR020578InterPro:IPR024169
iPTMnet:Q56YA5KEGG:00440+2.6.1.37KEGG:ath:AT2G13360KO:K00830
OMA:FIAMMDEPaxDb:Q56YA5Pfam:PF00266Pfam:Q56YA5
PhylomeDB:Q56YA5PIR:T52250PIRSF:PIRSF000524PRIDE:Q56YA5
PRO:PR:Q56YA5PROSITE:PS00595ProteinModelPortal:Q56YA5Proteomes:UP000006548
Reactome:R-ATH-389661RefSeq:NP_178969.1RefSeq:NP_849951.1SABIO-RK:Q56YA5
scanprosite:PS00595SMR:Q56YA5STRING:3702.AT2G13360.1SUPFAM:SSF53383
TAIR:AT2G13360tair10-symbols:AGTtair10-symbols:AGT1tair10-symbols:SGAT
UniGene:At.24853UniProt:Q56YA5
Coordinates (TAIR10) chr2:-:5539417..5540902
Molecular Weight (calculated) 44210.50 Da
IEP (calculated) 7.95
GRAVY (calculated) 0.02
Length 401 amino acids
Sequence (TAIR10)
(BLAST)
001: MDYMYGPGRH HLFVPGPVNI PEPVIRAMNR NNEDYRSPAI PALTKTLLED VKKIFKTTSG TPFLFPTTGT GAWESALTNT LSPGDRIVSF LIGQFSLLWI
101: DQQKRLNFNV DVVESDWGQG ANLQVLASKL SQDENHTIKA ICIVHNETAT GVTNDISAVR TLLDHYKHPA LLLVDGVSSI CALDFRMDEW GVDVALTGSQ
201: KALSLPTGLG IVCASPKALE ATKTSKSLKV FFDWNDYLKF YKLGTYWPYT PSIQLLYGLR AALDLIFEEG LENIIARHAR LGKATRLAVE AWGLKNCTQK
301: EEWISNTVTA VMVPPHIDGS EIVRRAWQRY NLSLGLGLNK VAGKVFRIGH LGNVNELQLL GCLAGVEMIL KDVGYPVVMG SGVAAASTYL QHHIPLIPSR
401: I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)