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AT2G12190.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.501
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cytochrome P450 superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: stem, leaf whorl, male gametophyte, flower, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 87, subfamily A, polypeptide 6 (TAIR:AT1G64940.1); Has 33026 Blast hits to 32861 proteins in 1697 species: Archae - 49; Bacteria - 3625; Metazoa - 11744; Fungi - 7006; Plants - 9305; Viruses - 3; Other Eukaryotes - 1294 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G12190-MONOMEReggNOG:COG2124eggNOG:KOG0156EMBL:AC005897
EMBL:AC007045EMBL:CP002685EnsemblPlants:AT2G12190EnsemblPlants:AT2G12190.1
entrez:815688Gene3D:1.10.630.10GeneID:815688GO:GO:0004497
GO:GO:0005506GO:GO:0016705GO:GO:0020037Gramene:AT2G12190.1
hmmpanther:PTHR24298hmmpanther:PTHR24298:SF45HOGENOM:HOG000218630InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT2G12190ncoils:Coil
OMA:FIGTIWWPfam:PF00067PhylomeDB:Q9ZUQ6PIR:E84501
PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086Proteomes:UP000006548
RefSeq:NP_178922.1scanprosite:PS00086SMR:Q9ZUQ6STRING:3702.AT2G12190.1
SUPFAM:SSF48264TAIR:AT2G12190TMHMM:TMhelixUniGene:At.25404
UniGene:At.66187UniProt:Q9ZUQ6
Coordinates (TAIR10) chr2:-:4891807..4893345
Molecular Weight (calculated) 59307.40 Da
IEP (calculated) 9.14
GRAVY (calculated) -0.23
Length 512 amino acids
Sequence (TAIR10)
(BLAST)
001: MEIWLLILGS LFLSLLLNLL LFRRRDSSSL PLPPDPNFFP FLGTLQWLRQ GLGGLNNYLR SVHHRLGPII TLRITSRPAI FVADRSLAHQ ALVLNGAVFA
101: DRPPAAPISK IISSNQHNIS SSLYGATWRL LRRNLTSEIL HPSRVRSYSH ARRWVLEILF DRFGKSRGEE PIVVVDHLHY AMFALLVLMC FGDKLDEKQI
201: KQVEYVQRRQ LLGFSRFNIL NLWPKFTKLI LRKRWEEFFQ MRREQHDVLL PLIRARRKIV EERKNRSSEE EEDNKVYVQS YVDTLLELEL PDEKRKLNED
301: EIVSLCSEFL NGGTDTTATA LQWIMANLVK NPEIQKRLYE EIKSVVGEEA KEVEEEDAQK MPYLKAVVME GLRRHPPGHF VLPHSVTEDT VLGGYKVPKK
401: GTINFMVAEI GRDPMVWEEP MAFKPERFMG EEEAVDITGS RGIKMMPFGA GRRICPGIGL AMLHLEYYVA NMVREFEWKE VQGHEVDLTE KFEFTVVMKH
501: SLKALAVLRR SH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)