AT2G05760.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 0.469 plasma membrane 0.358 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Xanthine/uracil permease family protein | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT2G34190.1); Has 8976 Blast hits to 8949 proteins in 1902 species: Archae - 67; Bacteria - 7337; Metazoa - 353; Fungi - 128; Plants - 443; Viruses - 1; Other Eukaryotes - 647 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:2180978..2183710 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 57134.60 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.50 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.50 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 520 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAEISHPPME QLQDLEYCID SNPPWPETVL LAFQNYILML GTSAFIPALL VPAMGGSDGD RARVIQTLLF VAGIKTLLQA LFGTRLPAVV GGSLAYVVPI 101: AYIINDSSLQ KISNDHERFI HTMRAIQGAL IVASSIQIIL GYSQVWGLFS RFFSPLGMAP VVGLVGLGMF QRGFPQLGNC IEIGLPMLLL VIGLTQYLKH 201: VRPFKDVPIF ERFPILICVT IVWIYAVILT ASGAYRGKPS LTQHSCRTDK ANLISTAPWF KFPYPLQWGP PTFSVGHSFA MMSAVLVSMV ESTGAYIAAS 301: RLAIATPPPA YVLSRGIGWQ GIGVLLDGLF GTGTGSTVLV ENVGLLGLTR VGSRRVVQVS AGFMIVFSTL GKFGAVFASI PVPIYAALHC ILFGLVAAVG 401: LSFLQFTNMN SMRNLMITGL SLFLGISIPQ FFAQYWDARH YGLVHTNAGW FNAFLNTLFM SPATVGLIIA VFMDNTMEVE RSKKDRGMPW WVKFRTFRGD 501: NRNEEFYTLP FNLNRFFPPT |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)