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AT5G40870.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : uridine kinase/uracil phosphoribosyltransferase 1
Curator
Summary (TAIR10)
Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities.
Computational
Description (TAIR10)
uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1); FUNCTIONS IN: uridine kinase activity, uracil phosphoribosyltransferase activity, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, nucleoside metabolic process, metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Phosphoribosyltransferase (InterPro:IPR000836), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 2 (TAIR:AT3G27190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G40870-MONOMERBioGrid:19339BRENDA:2.4.2.9BRENDA:2.7.1.48
EC:2.4.2.9EC:2.7.1.48eggNOG:COG0035eggNOG:COG0572
eggNOG:KOG4203EMBL:AB011477EMBL:AY080631EMBL:AY089970
EMBL:BT002336EMBL:CP002688EnsemblPlants:AT5G40870EnsemblPlants:AT5G40870.1
entrez:834088Gene3D:3.40.50.2020Gene3D:3.40.50.300GeneID:834088
Genevisible:Q9FKS0GO:GO:0004845GO:GO:0004849GO:GO:0005524
GO:GO:0005525GO:GO:0005737GO:GO:0005829GO:GO:0006206
GO:GO:0009507GO:GO:0044206GO:GO:0044211GO:GO:2000904
Gramene:AT5G40870.1gramene_pathway:2.4.2.9gramene_pathway:2.7.1.48gramene_pathway:PWYQT-4445
hmmpanther:PTHR10285hmmpanther:PTHR10285:SF71HOGENOM:HOG000262757InParanoid:Q9FKS0
InterPro:IPR000764InterPro:IPR006083InterPro:IPR027417InterPro:IPR029057
InterPro:IPR029930iPTMnet:Q9FKS0KEGG:00240+2.4.2.9+2.7.1.48KEGG:00240+2.7.1.48
KEGG:00983+2.7.1.48KEGG:ath:AT5G40870KO:K00876OMA:MDCFYKI
PANTHER:PTHR10285:SF71PaxDb:Q9FKS0Pfam:PF00485Pfam:PF14681
Pfam:Q9FKS0PhylomeDB:Q9FKS0PRIDE:Q9FKS0PRINTS:PR00988
PRO:PR:Q9FKS0ProteinModelPortal:Q9FKS0Proteomes:UP000006548Reactome:R-ATH-73614
RefSeq:NP_198903.1SMR:Q9FKS0STRING:3702.AT5G40870.1SUPFAM:SSF52540
SUPFAM:SSF53271TAIR:AT5G40870tair10-symbols:ATUK/UPRT1tair10-symbols:UK/UPRT1
tair10-symbols:UKL1TIGRfam:TIGR00235TIGRFAMs:TIGR00235UniGene:At.9230
UniPathway:UPA00574UniPathway:UPA00579UniProt:Q9FKS0
Coordinates (TAIR10) chr5:+:16375021..16378384
Molecular Weight (calculated) 54433.00 Da
IEP (calculated) 6.59
GRAVY (calculated) -0.25
Length 486 amino acids
Sequence (TAIR10)
(BLAST)
001: MPEDSSSLDY AMEKASGPHF SGLRFDGLLS SSPPNSSVVS SLRSAVSSSS PSSSDPEAPK QPFIIGVSGG TASGKTTVCD MIIQQLHDHR VVLVNQDSFY
101: RGLTSEELQR VQEYNFDHPD AFDTEQLLHC AETLKSGQPY QVPIYDFKTH QRRSDTFRQV NASDVIILEG ILVFHDSRVR NLMNMKIFVD TDADVRLARR
201: IRRDTVERGR DVNSVLEQYA KFVKPAFDDF VLPSKKYADV IIPRGGDNHV AVDLITQHIH TKLGQHDLCK IYPNVYVIQS TFQIRGMHTL IREKDISKHD
301: FVFYSDRLIR LVVEHGLGHL PFTEKQVVTP TGAVYTGVDF CKKLCGVSII RSGESMENAL RACCKGIKIG KILIHRDGDN GKQLIYEKLP HDISERHVLL
401: LDPVLATGNS ANQAIELLIQ KGVPEAHIIF LNLISAPEGI HCVCKRFPAL KIVTSEIDQC LNQEFRVIPG LGEFGDRYFG TDEEDQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)