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AT5G49020.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.945
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : protein arginine methyltransferase 4A
Curator
Summary (TAIR10)
Encodes a type I protein arginine methyltransferase. PRMT4a can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.
Computational
Description (TAIR10)
protein arginine methyltransferase 4A (PRMT4A); CONTAINS InterPro DOMAIN/s: Skb1 methyltransferase (InterPro:IPR007857); BEST Arabidopsis thaliana protein match is: protein arginine methyltransferase 4B (TAIR:AT3G06930.1); Has 2908 Blast hits to 2887 proteins in 698 species: Archae - 60; Bacteria - 734; Metazoa - 1196; Fungi - 253; Plants - 326; Viruses - 1; Other Eukaryotes - 338 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G49020-MONOMERBioCyc:ARA:GQT-1735-MONOMERBioGrid:20207EC:2.1.1.319
eggNOG:ENOG410XPDDeggNOG:KOG1500EMBL:AB017061EMBL:BT002972
EMBL:BT030319EMBL:BT030323EMBL:CP002688EnsemblPlants:AT5G49020
EnsemblPlants:AT5G49020.1entrez:834961Gene3D:3.40.50.150GeneID:834961
Genevisible:A3KPF2GO:GO:0005634GO:GO:0005737GO:GO:0005829
GO:GO:0006351GO:GO:0006355GO:GO:0008469GO:GO:0009909
GO:GO:0010228GO:GO:0016277GO:GO:0019919GO:GO:0034970
GO:GO:0034971GO:GO:0034972GO:GO:0035241GO:GO:0035242
GO:GO:0042803GO:GO:0046982hmmpanther:PTHR11006hmmpanther:PTHR11006:SF10
HOGENOM:HOG000198522InParanoid:A3KPF2InterPro:IPR025799InterPro:IPR029063
iPTMnet:A3KPF2KEGG:ath:AT5G49020KO:K05931OMA:FHILQTG
PANTHER:PTHR11006PaxDb:A3KPF2Pfam:A3KPF2Pfam:PF05185
Pfscan:PS51678PhylomeDB:A3KPF2PRIDE:A3KPF2PRO:PR:A3KPF2
PROSITE:PS51678ProteinModelPortal:A3KPF2Proteomes:UP000006548RefSeq:NP_199713.2
RefSeq:NP_974913.1SMR:A3KPF2STRING:3702.AT5G49020.1SUPFAM:SSF53335
TAIR:AT5G49020tair10-symbols:ATPRMT4Atair10-symbols:PRMT4AUniGene:At.27882
UniProt:A3KPF2
Coordinates (TAIR10) chr5:+:19871341..19874683
Molecular Weight (calculated) 58860.00 Da
IEP (calculated) 5.22
GRAVY (calculated) -0.17
Length 528 amino acids
Sequence (TAIR10)
(BLAST)
001: MEIPSLNKQQ EFTLASVTDL TSPSSSLSSS PVVATFSCVN EVKELRFQES KSSDGFSFDL SSTQLFKLGP LQFTCVSDGS ISSAKEKSSF SRGVVIKFRD
101: EKDSKEFCDS FEECKKDDAV KQGSALPNGT VVSANKSKFD DKIEAASAKM YFHYYGQLLH QQNMLQDYVR TGTYHAAVME NRSDFSGRVV VDVGAGSGIL
201: SMFAALAGAK HVYAVEASEM AEYARKLIAG NPLLAERITV IKGKIEDIEL PEKADVLISE PMGTLLVNER MLETYVIARD RFLSPNGKMF PTVGRIHMAP
301: FADEFLFVEM ANKALFWQQQ NYYGVDLTPL YVSAHQGYFS QPVVDAFDPR LLVAPSMFHV IDFTMMTEEQ FYEIDIPLKF TASVCTRIHG LACWFDVLFD
401: GSTVQRWFTT APGAPTTHWY QIRCVLSQPI HVMAGQEITG RLHLIAHSAQ SYTINLTLSA KMWGPGANQG GILQTSSCKL DLKEPYYRMS QPQVYPTQEP
501: PAQSQDIHIH SDDLEELELL QQNANAQL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)