AT2G05755.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.827 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Nodulin MtN21 /EamA-like transporter family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); Has 4644 Blast hits to 4643 proteins in 977 species: Archae - 33; Bacteria - 1970; Metazoa - 235; Fungi - 138; Plants - 28; Viruses - 0; Other Eukaryotes - 2240 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:2170905..2173646 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43671.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.36 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.61 | ||||||||||||||||||||||||||||
| Length | 401 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MASSSPETRI ADEHLSLELT VRDLESTALE SASSAPELSS DEIIPLLNQN QRPRINIFSA SYTRRKPSEQ VIKVTETEIS PVTQFSSWIW SGSRYSGLLC 101: MALSSTLYLI MELVSDTFSV QPIPLFETAF MRCTIILILS YLWLKRIGQP IFGPAHARKL LVSRALVGYL SLFSFIFSIQ MLPLSQAIVL SFLNPIMASI 201: AARVVMHEKL KITDIGGLAC SFFGVLFIFG PTLTVQVGLE GKNENLKGNH HIYAFLLGLF SSITGGITYC LIKAAAKASE QPVITVLSFG LVACPATAIC 301: MFSFESFVLP AFDTLVSMIV LGLLAFCAEV LLARGLQLEK ISKAANVLYI EVVLSQLWLV STGKTGSPGL FSRLVGCLLI LLSVGYTVYI GPAKDTESSI 401: P |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)