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AT2G03780.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Translin family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Translin family protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translin, C-terminal (InterPro:IPR016069), Translin (InterPro:IPR002848), Translin, N-terminal (InterPro:IPR016068); Has 561 Blast hits to 561 proteins in 195 species: Archae - 92; Bacteria - 2; Metazoa - 209; Fungi - 153; Plants - 36; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2178eggNOG:KOG3066EMBL:AK117172EMBL:BT024509
EMBL:CP002685EnsemblPlants:AT2G03780EnsemblPlants:AT2G03780.1entrez:814905
Gene3D:1.20.58.190Gene3D:1.20.58.200GeneID:814905GO:GO:0043565
Gramene:AT2G03780.1hmmpanther:PTHR10741hmmpanther:PTHR10741:SF5HOGENOM:HOG000008075
InterPro:IPR002848InterPro:IPR016068InterPro:IPR016069KEGG:ath:AT2G03780
ncoils:CoilOMA:MSTESSMPANTHER:PTHR10741Pfam:PF01997
PhylomeDB:Q8GZ75Proteomes:UP000006548Reactome:R-ATH-426486RefSeq:NP_178473.2
SMR:Q8GZ75STRING:3702.AT2G03780.1SUPFAM:0047790SUPFAM:SSF74784
TAIR:AT2G03780UniGene:At.41373UniProt:Q8GZ75
Coordinates (TAIR10) chr2:-:1152716..1154285
Molecular Weight (calculated) 32705.80 Da
IEP (calculated) 6.79
GRAVY (calculated) -0.19
Length 287 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSCSSSAFQ RVAFMLMAPK LKPQRLHQIA ESGVEHLVKK ARTMSTESSM KDAFSTYADY LNNFNEKRER VVKVSRDITM NSKKVIFQVH RLSKDNKEEV
101: LEKAGKDLEA VRDQHFARLM KELQGTDFWK LRRAYSPGVQ EYVEAATFYK FCLSGTLCTL DEINTTLVPL SDPSLEPLQI NILDYILGLA DLTGELMRMA
201: IGRISDGEIE FAQRICQFVR QIHRELMLVV PKMDDSYDMK SKMEVMLQSV IKIENACFSV HVRGLEYIPL LGDNAPTSYL LGAADVE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)