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AT2G03140.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: esterase/lipase/thioesterase family protein (TAIR:AT3G50790.1); Has 27771 Blast hits to 17358 proteins in 1793 species: Archae - 160; Bacteria - 9618; Metazoa - 7252; Fungi - 2757; Plants - 1033; Viruses - 122; Other Eukaryotes - 6829 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0429eggNOG:COG1266eggNOG:KOG1838EMBL:CP002685
EnsemblPlants:AT2G03140EnsemblPlants:AT2G03140.1entrez:814843ExpressionAtlas:F4IS90
Gene3D:3.40.50.1820GeneID:814843GO:GO:0016021GO:GO:0016787
Gramene:AT2G03140.1hmmpanther:PTHR10794hmmpanther:PTHR10794:SF47InterPro:IPR003675
InterPro:IPR029058ncoils:CoilPaxDb:F4IS90Pfam:PF02517
PRIDE:F4IS90ProteinModelPortal:F4IS90Proteomes:UP000006548Reactome:R-ATH-1483191
RefSeq:NP_178413.2STRING:3702.AT2G03140.2SUPFAM:SSF53474TAIR:AT2G03140
TMHMM:TMhelixUniGene:At.43392UniProt:F4IS90
Coordinates (TAIR10) chr2:+:942000..949337
Molecular Weight (calculated) 196061.00 Da
IEP (calculated) 4.73
GRAVY (calculated) -0.37
Length 1797 amino acids
Sequence (TAIR10)
(BLAST)
0001: MYSSSSSSSI FLQFPPARIT TASPFILRRS RKRGARFKRQ SRNLVLVNSS IFPPPFDGSV PLDSSLAPSL AGIASGLAVY LSSRFFGKSL EKISDKIVDD
0101: VVVGEWILFT TPTPFNRFVL LRCSLLSFDD DSEKSLSDRL VTEERHFVTL DSGKIVRDGA VTDEKTPLEY QRVCITMEDG GVVSLDWPAN LDIREERGLD
0201: TTVVFIPGTP EGSMEEGVRS FVCEALRRGV FPVVMNPRGC AGSPLTTPRL FTAGDSDDIS TALRFLSKTR PWTTLTAVGR GYGANMLTKY LAEAGERTPL
0301: TAAVCIDNPF DLEEITRTSP YSTSLDQQLT RGLVEILLAN KELFQGRAKA FDVGKALCSK SVREFDKALS MVTYGCESIE DFYSSCATRE VIGEVKVPLL
0401: FIQNDDVVPP YTIPRSSIAE NPFTSLLLCS SSPNLIDGRT VAVSWCQDLA SEWLTAVELG LLKGRHPLLE DVDVTVNPSK GLVFSEARAP EKSIGAKKLV
0501: QAAHEKTVNG YHLDPFRETL EDSDMTPNSN LSPETDLEKN VKIDYGSDET ENNIVSTRVE SIEDNESNVE ESDRGQVLQT AEVVVSMLDV TMPGTLKAEE
0601: KKKVMDAVGR GETVLTALQD AVPEDVREKL TTAVTGILQS GGTKLNLENL KLPSIAPGLK KAEEEKKETS SAIGQSDSYS PDPKDKSDGL VSGSDETISG
0701: SDNSPGGVEL EHSPSKVSQR NSDSGKSQPV DNDQDDSPGN HESHTNEKTS AADDSEMASE AKSDSANQGP IGAEAVTNND DKVEQGSGVA THQGQVETSK
0801: NDEKGAPIAN EKSSVADGFE KASDAKNDST NPQPVGADDI TSDGDKVDQG VVLAQQQRKD ETSKSDENAK QSATDQNKVT STDNEGDAGK SSASQPVEKD
0901: ESNDQSKETK VMQPVSDQTK PAIQEPNQPN FNVSQAFEAL TGMDDSTQVA VNSVFGVLEN MISQLDEEKK EGNEVSDEKN LKDEKNLKDA KNVTNEVVSP
1001: SEEEIPYKRE TKSLMPSAKS RDPACSVSET EKCSDNDKVT GVVIEKQLGR DEFVIGKHSP KILPERKTDS IENSSHDGYL GEELSKEKIA KQLDLDTTTA
1101: LMLDYYPEEG KWKLLDQQPK RLDDDYYPEE GKWKLLDQQP EYLGNVADNA AASRNTHDNV QVHSLSVDNE ETIEPSYVIV DHEQELELSG MHDAADNQND
1201: GPHKLDEGCE ELEHLINVIV SDSLNVEIQR RMGSAGMRQI ESQLSRDIKK VAKTFSYAVV YSEPTWTFKR NSKTSNVPAG KVGKLRGDAI IRAIASAVQE
1301: AHFLRQVLPI GVVVGSVLAA LRKYFDVSTT TNNAKRDVVP GRRQKYENNG AMASVLPDKV SKETKQNNSS IGEMVESGLQ SINNKSAMVG AVTAALGASA
1401: MLVQHEDPQR GGIMSKSSDK DSQQKESGQL DQSSMVGSFA EKAMSIAGPA VPTKETGEVD QDRIVAMLAD LGQRGGILSL VGKLALLWGG LRGAMSLTDR
1501: LIQFLHMDEW PLLKRAVGFI GMVLVLWSPV VIPLLPTLLQ NWSTSNPSRV AELASVVGLY VAVFILVMLW GKRVRKYENP FKQYGLDLKA SNKEKIQEFL
1601: KAFAGGITVV LLIQFINAIS GAAFLSRPPY FPHSFDAMKW LKGCGQFLLL IIRGFTAATF VVLVEELLFR SWMPAEIAID LGYHQSIIIT GLIFALFQRS
1701: LRSIPGFWLL SLALTWARER SQGNLIVPIG LRAGIIASSF ILQSGGFLTY NPSSPVWIAG SRPSQPFSGV VGLMVSLALA LILYPKRSPE TKMQKYN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)