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AT1G77330.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.883
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: ACC oxidase 2 (TAIR:AT1G62380.1); Has 8581 Blast hits to 8541 proteins in 996 species: Archae - 0; Bacteria - 1106; Metazoa - 118; Fungi - 1011; Plants - 4940; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G77330-MONOMEREC:1.14.17.4eggNOG:COG3491eggNOG:KOG0143
EMBL:AC078898EMBL:AK228946EMBL:AY086710EMBL:BT026444
EMBL:CP002684EnsemblPlants:AT1G77330EnsemblPlants:AT1G77330.1entrez:844069
Gene3D:2.60.120.330GeneID:844069Genevisible:Q0WPW4GO:GO:0006952
GO:GO:0009693GO:GO:0009815GO:GO:0031418GO:GO:0046872
Gramene:AT1G77330.1gramene_pathway:1.14.17.4gramene_pathway:ETHYL-PWYHOGENOM:HOG000276735
InParanoid:Q0WPW4InterPro:IPR005123InterPro:IPR026992InterPro:IPR027443
KEGG:ath:AT1G77330KO:K05933ncoils:CoilOMA:GMEEGHI
PaxDb:Q0WPW4Pfam:PF03171Pfam:PF14226Pfam:Q0WPW4
Pfscan:PS51471PhylomeDB:Q0WPW4PIR:C96802PRIDE:Q0WPW4
PRO:PR:Q0WPW4PROSITE:PS51471ProteinModelPortal:Q0WPW4Proteomes:UP000006548
RefSeq:NP_565154.1SMR:Q0WPW4STRING:3702.AT1G77330.1SUPFAM:SSF51197
TAIR:AT1G77330UniGene:At.27802UniPathway:UPA00384UniProt:Q0WPW4
Coordinates (TAIR10) chr1:-:29063215..29064447
Molecular Weight (calculated) 34948.40 Da
IEP (calculated) 4.78
GRAVY (calculated) -0.57
Length 307 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIPVIDFSK LNGEEREKTL SEIARACEEW GFFQLVNHGI PLELLNKVKK LSSDCYKTER EEAFKTSNPV KLLNELVQKN SGEKLENVDW EDVFTLLDHN
101: QNEWPSNIKE TMGEYREEVR KLASKMMEVM DENLGLPKGY IKKAFNEGME DGEETAFFGT KVSHYPPCPH PELVNGLRAH TDAGGVVLLF QDDEYDGLQV
201: LKDGEWIDVQ PLPNAIVINT GDQIEVLSNG RYKSAWHRVL AREEGNRRSI ASFYNPSYKA AIGPAAVAEE EGSEKKYPKF VFGDYMDVYA NQKFMPKEPR
301: FLAVKSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)