AT1G76790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.977 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-methyltransferase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G21100.1); Has 3410 Blast hits to 3406 proteins in 587 species: Archae - 1; Bacteria - 1002; Metazoa - 109; Fungi - 633; Plants - 1541; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28822355..28823630 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40224.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.76 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 367 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGHLIPQTGD EETELGLAAV RLANCAAFPM VFKAAIELGV IDTLYLAARD DVTGSSSFLT PSEIAIRLPT KPSNPEAPAL LDRILRLLAS YSMVKCQIID 101: GNRVYKAEPI CRYFLKDNVD EELGTLASQL IVTLDTVFLN TWGELKNVVL EGGVAFGRAN GGLKLFDYIS KDERLSKLFN RTGFSVAVLK KILQVYSGFE 201: GVNVLVDVGG GVGDTLGFVT SKYPNIKGIN FDLTCALTQA PSYPNVEHVA GDMFVDVPKG DAILLKRILH DWTDEDCEKI LKNCWKALPE NGKVIVMEVV 301: TPDEADNRDV ISNIAFDMDL LMLTQLSGGK ERSRAEYVAM AANSGFPRCN FVCSAYHLWV IELTKQA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)