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AT4G37410.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21515817 (2011): endoplasmic reticulum
  • PMID:31541795 (2020): plasma membrane
  • PMID:22923678 (2012): endoplasmic reticulum
  • PMID:22318864 (2012): plasma membrane
  • PMID:16618929 (2006): endoplasmic reticulum
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 81, subfamily F, polypeptide 4
Curator
Summary (TAIR10)
member of CYP81F
Computational
Description (TAIR10)
cytochrome P450, family 81, subfamily F, polypeptide 4 (CYP81F4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily F, polypeptide 3 (TAIR:AT4G37400.1); Has 35936 Blast hits to 35767 proteins in 1827 species: Archae - 66; Bacteria - 5738; Metazoa - 11729; Fungi - 7404; Plants - 9478; Viruses - 6; Other Eukaryotes - 1515 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G37410-MONOMEREC:1.14.-.-eggNOG:COG2124eggNOG:KOG0156
EMBL:AL035601EMBL:AL161591EMBL:AY084273EMBL:BT029244
EMBL:CP002687EnsemblPlants:AT4G37410EnsemblPlants:AT4G37410.1entrez:829895
Gene3D:1.10.630.10GeneID:829895GO:GO:0004497GO:GO:0005506
GO:GO:0005783GO:GO:0016020GO:GO:0016021GO:GO:0016709
GO:GO:0020037GO:GO:0042343GO:GO:0044550GO:GO:0098542
Gramene:AT4G37410.1gramene_pathway:2.1.1.-gramene_pathway:PWY-601hmmpanther:PTHR24298
hmmpanther:PTHR24298:SF171HOGENOM:HOG000218627InterPro:IPR001128InterPro:IPR002401
InterPro:IPR017972KEGG:ath:AT4G37410KO:K00517OMA:IMVASSE
PaxDb:Q9SZU1Pfam:PF00067PhylomeDB:Q9SZU1PIR:T04735
PRINTS:PR00385PRINTS:PR00463PROSITE:PS00086ProteinModelPortal:Q9SZU1
Proteomes:UP000006548RefSeq:NP_195457.1scanprosite:PS00086SMR:Q9SZU1
STRING:3702.AT4G37410.1SUPFAM:SSF48264TAIR:AT4G37410tair10-symbols:CYP81F4
TMHMM:TMhelixUniGene:At.22792UniProt:Q9SZU1
Coordinates (TAIR10) chr4:+:17590848..17592780
Molecular Weight (calculated) 57171.80 Da
IEP (calculated) 8.84
GRAVY (calculated) -0.14
Length 501 amino acids
Sequence (TAIR10)
(BLAST)
001: MFNYVIILPL ALFLLAYKFF FTSKKQRYYL PPSPSYSLPI LGHHLLIKPP VHRLFHRLSN IHGPIFYLRL GSRRAVVISS SSLARECFTG QNDVIVSNRP
101: RFLTSKYIAY NYTTIATTSY GDHWRNLRRI CSLEIVSSKR LANFLHIRKE EIQRMLTRLS RDARVGKEVE LESILYDLTF NNIVRMVTGK IYYGDDVSDK
201: EEAELFKKLF TFITTNSGAR HPGEYLPFMK IFGGSFEKEV KAAAKVIDEM LQRLLDECKS DKDGNTMVNH LLSLQQDDPE YYTDIIIKGL MLGIMVASSE
301: TSALTIEWAM ASLLNHPKVL DKVKLEIDEI IGQDRLIEES DIANLPYLQN VVSETLRLHP AAPVLVPRST AEDIKIGGYD VPRDTMVMVN AWAIHRDPDL
401: WTEPERFNPE RFNGGEGEKD DVRMLIAFGS GRRICPGVGL AHKIVTLALG SLIQCFDWKK VNEKEIDMSE GPGMAMRMMV PLRALCKTRP IMNKLPAYTK
501: V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)