AT4G37410.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cytochrome P450, family 81, subfamily F, polypeptide 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
member of CYP81F | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
cytochrome P450, family 81, subfamily F, polypeptide 4 (CYP81F4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily F, polypeptide 3 (TAIR:AT4G37400.1); Has 35936 Blast hits to 35767 proteins in 1827 species: Archae - 66; Bacteria - 5738; Metazoa - 11729; Fungi - 7404; Plants - 9478; Viruses - 6; Other Eukaryotes - 1515 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:17590848..17592780 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 57171.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.84 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.14 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 501 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MFNYVIILPL ALFLLAYKFF FTSKKQRYYL PPSPSYSLPI LGHHLLIKPP VHRLFHRLSN IHGPIFYLRL GSRRAVVISS SSLARECFTG QNDVIVSNRP 101: RFLTSKYIAY NYTTIATTSY GDHWRNLRRI CSLEIVSSKR LANFLHIRKE EIQRMLTRLS RDARVGKEVE LESILYDLTF NNIVRMVTGK IYYGDDVSDK 201: EEAELFKKLF TFITTNSGAR HPGEYLPFMK IFGGSFEKEV KAAAKVIDEM LQRLLDECKS DKDGNTMVNH LLSLQQDDPE YYTDIIIKGL MLGIMVASSE 301: TSALTIEWAM ASLLNHPKVL DKVKLEIDEI IGQDRLIEES DIANLPYLQN VVSETLRLHP AAPVLVPRST AEDIKIGGYD VPRDTMVMVN AWAIHRDPDL 401: WTEPERFNPE RFNGGEGEKD DVRMLIAFGS GRRICPGVGL AHKIVTLALG SLIQCFDWKK VNEKEIDMSE GPGMAMRMMV PLRALCKTRP IMNKLPAYTK 501: V |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)