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AT1G76700.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.941
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock N-terminal domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT1G21080.1); Has 22668 Blast hits to 22554 proteins in 3188 species: Archae - 168; Bacteria - 9129; Metazoa - 3918; Fungi - 2179; Plants - 2304; Viruses - 20; Other Eukaryotes - 4950 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2214eggNOG:KOG0691EMBL:AC010718EMBL:AK117326
EMBL:BT005350EMBL:CP002684EMBL:Y11969EnsemblPlants:AT1G76700
EnsemblPlants:AT1G76700.1entrez:844003Gene3D:1.10.287.110GeneID:844003
Genevisible:Q8GYX8Gramene:AT1G76700.1hmmpanther:PTHR24078hmmpanther:PTHR24078:SF214
HOGENOM:HOG000186929InParanoid:Q8GYX8InterPro:IPR001623InterPro:IPR018253
InterPro:IPR026894KEGG:ath:AT1G76700OMA:NISFCKVPaxDb:Q8GYX8
Pfam:PF00226Pfam:PF14308Pfam:Q8GYX8Pfscan:PS50076
PhylomeDB:Q8GYX8PIR:D96795PRIDE:Q8GYX8PRINTS:PR00625
PRO:PR:Q8GYX8PROSITE:PS00636PROSITE:PS50076ProteinModelPortal:Q8GYX8
Proteomes:UP000006548RefSeq:NP_177796.1scanprosite:PS00636SMART:SM00271
SMR:Q8GYX8STRING:3702.AT1G76700.1SUPFAM:SSF46565TAIR:AT1G76700
UniGene:At.48382UniGene:At.70992UniProt:Q8GYX8
Coordinates (TAIR10) chr1:-:28780619..28783022
Molecular Weight (calculated) 44666.40 Da
IEP (calculated) 4.91
GRAVY (calculated) -0.61
Length 398 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKETEYYDV LGVSPTATES EIKKAYYIKA RQVHPDKNPN DPQAAHNFQV LGEAYQVLSD SGQRQAYDAC GKSGISTDAI IDPAAIFAML FGSELFEGYI
101: GQLAMASMAS LDIFTEGDQF DTKKIQEKLR IVQKEREDKL AQILKDRLNE YVINKDEFIS NAEAEVARLS NAAYGVDMLN TIGYIYVRQA AKELGKKAIY
201: LGVPFIAEWF RNKGHFIKSQ LTAATGAYAL FQLQEEMKRQ LNTEGNYTEE ELEEYLQAHK RVMIDSLWKL NVADIEATLC RVCQLVLQDP EAKREELRTR
301: ARGLKALGRI FQRAKTASES DPLENSEPQK LNGNGKNHDE DTSTSPKSSE ASHSTSGPQE PQSPYVEEFK LGDEQFNYYF PRPAPPPGAG KYSSSGYD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)