AT1G76240.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Arabidopsis protein of unknown function (DUF241) | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Arabidopsis protein of unknown function (DUF241); FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT2G17080.1); Has 409 Blast hits to 404 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28602949..28603875 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 34884.10 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.89 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||||||||||
| Length | 308 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVGVFRRSLS FPNKPCGRSS PSSKPRVSHH TRSISLPCRS HPLISHVNHE ISQLKSWFSF AGETHSRTTS WITDGLSLLK DVQETLADIL QLPQSQESLR 101: NRPVFFENLL EDLLRFVDAY GIFRTSILCL REHQSAAQVA LRKKDDEKIA SYLKSRRSLA RDIAKLTSSI REPKTKHQHC HVDNVNGTYG DAELASVIGD 201: VIEVTVLVSV ALFNGVYLSL RATKTTPFIG FLKRSEKKEK LDEGIVELKQ VEEKSLIGLS KKKNEEVKSL MKRMMELENS IREIECESEK VFRGLISTRV 301: SLLNALTH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)