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AT1G75390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : basic leucine-zipper 44
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
basic leucine-zipper 44 (bZIP44); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: G-box binding factor 6 (TAIR:AT4G34590.1); Has 1696 Blast hits to 1696 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 67; Plants - 1605; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IZTGeggNOG:ENOG410ZM7QEMBL:AB493534EMBL:AK318829
EMBL:AK318991EMBL:CP002684EnsemblPlants:AT1G75390EnsemblPlants:AT1G75390.1
entrez:843875GeneID:843875GO:GO:0003700GO:GO:0009845
GO:GO:0043565GO:GO:0044212GO:GO:0046982Gramene:AT1G75390.1
hmmpanther:PTHR22952hmmpanther:PTHR22952:SF162HOGENOM:HOG000237945IntAct:C0Z2L5
InterPro:IPR004827ncoils:CoilOMA:LRKENHQPfam:PF00170
Pfscan:PS50217PhylomeDB:C0Z2L5PROSITE:PS00036PROSITE:PS50217
Proteomes:UP000006548RefSeq:NP_177672.2scanprosite:PS00036SMART:SM00338
SMR:C0Z2L5STRING:3702.AT1G75390.1SUPFAM:SSF57959TAIR:AT1G75390
tair10-symbols:AtbZIP44tair10-symbols:bZIP44UniGene:At.16252UniGene:At.75638
UniProt:C0Z2L5
Coordinates (TAIR10) chr1:+:28292224..28292745
Molecular Weight (calculated) 19074.40 Da
IEP (calculated) 6.95
GRAVY (calculated) -0.61
Length 173 amino acids
Sequence (TAIR10)
(BLAST)
001: MNNKTEMGSS TSGNCSSVST TGLANSGSES DLRQRDLIDE RKRKRKQSNR ESARRSRMRK QKHLDDLTAQ VTHLRKENAQ IVAGIAVTTQ HYVTIEAEND
101: ILRAQVLELN HRLQSLNEIV DFVESSSSGF GMETGQGLFD GGLFDGVMNP MNLGFYNQPI MASASTAGDV FNC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)