AT1G75140.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19370.1); Has 51 Blast hits to 49 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28202166..28204019 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 68912.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.19 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 617 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADSQNGKSA FFFFFVSLIL LFLSPSYSDV TASESDPIPY ENSDASPGVV TSSESDRQGV SLHRLEELVR NLTELVARLD AKLSETPFKV KKEITRDEIE 101: EKAKAFSVTK YSPFWSERFE FTSAVKLDSE ATCINVLPFR DHEGLSKYFA VGDSSGRVFV FLRNGDVLVE FFTTCDSPIT AMVSYMSVYK NESFVVTGHQ 201: SGVILLHRLR EGSIGEDLNS AVMENVGKFD GTEDGLQVTL LEVHHVGRVR YILATDLSGK LTVFTENRTV YGSVSPTSRP LVFLKQRLLF LTETGAGSLD 301: LRSMKIRESE CEGLNHSLAR SYVFDASERA KAYGFTSEGE IIHVLLLGDI MNFKCRVRSK KKVQMEEPVA LQAIKGYLLI VNQEKVFVYN VSTQHYVRTT 401: GPRLLFPAAL EDIRSTFLSH RESTKTTDHQ KLEKVTPLIA SDREKLLVMG LGDGYVATYK SKLPISKAEF NTMLWSSPVF FFILFLFGAW HFFSKKKESL 501: TAWGPDDPFS STTMSSSSTT TAQNSSAFSE STRRNDDHMD LRRRYVSPSR YPPGAATGAY RSVGSNDPSS RAPVETTNYR TTAQEMKYRG GSGLDSGGFG 601: KRRESLFGNN KALDDES |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)