AT1G74330.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18670.1); Has 123005 Blast hits to 121589 proteins in 4349 species: Archae - 90; Bacteria - 13409; Metazoa - 46270; Fungi - 12908; Plants - 29866; Viruses - 453; Other Eukaryotes - 20009 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:27943618..27947109 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78738.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.69 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||||||||||||||
| Length | 699 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCVSSKQTV SVTPAIDHSG VFKDNENECS GSGRIVVEDP PRPTLKKLVS WRSRSGKRRS QKSGSELGSE SGRASDSLSF RLGNVSRYLE AEQVAAGWPA 101: WLSNVAGEAI HGWVPLRSDA FEKLEKIGQG TYSNVFRAVE TETGRIVALK KVRFDNFEPE SVKFMAREIL ILRRLNHPNI IKLEGLITSK LSCNIQLVFE 201: YMEHDLTGLL SSPDIKFTTP QIKCYMKQLL SGLDHCHSRG VMHRDIKGSN LLLSNEGILK VADFGLANFS NSSGHKKKPL TSRVVTLWYR PPELLLGATD 301: YGASVDLWSV GCVFAELLLG KPILRGRTEV EQLHKIFKLC GSPPEDYWKK SKLPHAMLFK PQQTYDSCLR ETLKDLSETE INLIETLLSI DPHKRGTASS 401: ALVSQYFTTK PFACDPSSLP IYPPSKEIDT KHRDEAARKK ISGNGRRGID PRKPSRKAHS FNRLAPDVRH QTETFQKRIG HLVHSSIESD ARLCGKLQNP 501: LDHKKDEASH VKHASQGDVP FSGPLQVSKS NSFAWAKREK DDVCVRVHNR SLSRGYIPSL SGHSPAFNGK SDVESKINKD EKEDKTDSRG EESYEMVKRS 601: MLKQWRQLER PDSFGASDEY HSQELSLGLY QRDEMAKKMG NNLGDGDKIE FSGPLLSQSY GVDELLERHE RNIRKLIRKP WFQKVQDKQK KILLFSSEL |
||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)