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AT1G68410.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein phosphatase 2C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G09160.1); Has 5348 Blast hits to 5347 proteins in 441 species: Archae - 2; Bacteria - 344; Metazoa - 1196; Fungi - 481; Plants - 2242; Viruses - 4; Other Eukaryotes - 1079 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G68410-MONOMERBioCyc:ARA:GQT-2522-MONOMERBioGrid:28391EC:3.1.3.16
eggNOG:COG0631eggNOG:KOG0698EMBL:AC015986EMBL:AY050881
EMBL:AY091295EMBL:CP002684EnsemblPlants:AT1G68410EnsemblPlants:AT1G68410.1
EnsemblPlants:AT1G68410.2entrez:843170Gene3D:3.60.40.10GeneID:843170
Genevisible:Q9M9C6GO:GO:0004722GO:GO:0046872Gramene:AT1G68410.1
Gramene:AT1G68410.2hmmpanther:PTHR13832hmmpanther:PTHR13832:SF330HOGENOM:HOG000240114
InParanoid:Q9M9C6InterPro:IPR001932InterPro:IPR015655KEGG:ath:AT1G68410
OMA:KPTVRYGPANTHER:PTHR13832PaxDb:Q9M9C6Pfam:PF00481
Pfam:Q9M9C6Pfscan:PS51746PhylomeDB:Q9M9C6PIR:A96708
PRIDE:Q9M9C6PRO:PR:Q9M9C6PROSITE:PS51746ProteinModelPortal:Q9M9C6
Proteomes:UP000006548RefSeq:NP_001031252.1RefSeq:NP_177008.1SMART:SM00331
SMART:SM00332SMR:Q9M9C6STRING:3702.AT1G68410.1SUPFAM:SSF81606
TAIR:AT1G68410UniGene:At.26552UniProt:Q9M9C6
Coordinates (TAIR10) chr1:-:25650262..25652255
Molecular Weight (calculated) 47043.30 Da
IEP (calculated) 8.36
GRAVY (calculated) -0.23
Length 436 amino acids
Sequence (TAIR10)
(BLAST)
001: MASREGKRRN HNHDDEKLVP LAALISRETK AAKMEKPIVR FGQAAQSRKG EDYVLIKTDS LRVPSNSSTA FSVFAVFDGH NGKAAAVYTR ENLLNHVISA
101: LPSGLSRDEW LHALPRALVS GFVKTDKEFQ SRGETSGTTA TFVIVDGWTV TVACVGDSRC ILDTKGGSVS NLTVDHRLED NTEERERVTA SGGEVGRLSI
201: VGGVEIGPLR CWPGGLCLSR SIGDMDVGEF IVPVPFVKQV KLSNLGGRLI IASDGIWDAL SSEVAAKTCR GLSAELAARQ VVKEALRRRG LKDDTTCIVV
301: DIIPPENFQE PPPSPPKKHN NFFKSLLFRK KSNSSNKLSK KLSTVGIVEE LFEEGSAMLA ERLGSGDCSK ESTTGGGIFT CAICQLDLAP SEGISVHAGS
401: IFSTSLKPWQ GPFLCTDCRD KKDAMEGKRP SGVKVI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)