AT1G72880.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.990 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Survival protein SurE-like phosphatase/nucleotidase | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Survival protein SurE-like phosphatase/nucleotidase; FUNCTIONS IN: hydrolase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Survival protein SurE-like phosphatase/nucleotidase (InterPro:IPR002828); BEST Arabidopsis thaliana protein match is: Survival protein SurE-like phosphatase/nucleotidase (TAIR:AT4G14930.1); Has 4548 Blast hits to 4546 proteins in 1570 species: Archae - 197; Bacteria - 3352; Metazoa - 2; Fungi - 8; Plants - 92; Viruses - 0; Other Eukaryotes - 897 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:27423678..27425928 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40675.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.13 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||
| Length | 385 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTSKNNGLSA ALVSNLQDVL SKRKVGNEEK VGSDGSAEEA PSTSDSVDVA SVEEEIDDSR PIVLVTNGDG IDSPGLVSLV EALVLEGLYN VHVCAPQTDK 101: SASAHSTTPG ETIAVSSVKL KGATAFEVSG TPVDCISLGL SGALFAWSKP ILVISGINQG SSCGHQMFYS GAVAGGREAL ISGVPSLSIS LNWKKNESQE 201: SHFKDAVGVC LPLINATIRD IAKGVFPKDC SLNIEIPTSP SSNKGFKVTK QSMWRQYPSW QAVSANRHPG AGNFMSNQQS LGAQLAQLGR DASAAGAARR 301: FTTQKKSIVE IESVGVAGKT DTRVKKFFRL EFLAKEQEHT DEDLDVKALE DGFVSVTPFS LLPKTDSETQ AAASEWISKA LNSDQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)