AT3G12150.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.999 What is SUBAcon? |
|
||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2048 (InterPro:IPR019149); Has 421 Blast hits to 334 proteins in 155 species: Archae - 2; Bacteria - 147; Metazoa - 215; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:-:3876688..3878621 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40786.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.39 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||
| Length | 363 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRTMVTTKLG MLHYVIDHIY GAFMHRTKMT PPFFSRGWGG PNLELLERMV QRLFPLEVQG QNWPPPLVRP VWRTVWETKT ATLREGVFQT PCADELTAAL 101: PPESRTARVA WLVPKNVPPQ KMACVVHLAG TGDHTYDRRL RLGGPLVKQN IATMVLESPF YGQRRPFLQC GARLLCVSDL LLLGRATIEE SRSLIHWLDT 201: EEGFGKMGVC GLSMGGVHAS MVGSLHPTPV ATLPFLSPHS AVVAFCEGIL KYGTAWEALR EELAAQKITM TLDEVRERMR NVLSLTDVTR FPIPKNPDAV 301: IFVAATDDGY IPKHSVLELQ KAWPGSEVRW VTGGHVSSFI LHNDEFRRAI VDGLDRLDWK ESW |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)