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AT1G70895.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : CLAVATA3/ESR-RELATED 17
Curator
Summary (TAIR10)
Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon.
Computational
Description (TAIR10)
CLAVATA3/ESR-RELATED 17 (CLE17); Has 12 Blast hits to 12 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JUM9eggNOG:ENOG41106RNEMBL:AC008148EMBL:AY088427
EMBL:BT024647EMBL:CP002684EnsemblPlants:AT1G70895EnsemblPlants:AT1G70895.1
EnsemblPlants:AT1G70895.2entrez:843428GeneID:843428Genevisible:Q8L9H6
GO:GO:0005615GO:GO:0007275GO:GO:0045168Gramene:AT1G70895.1
Gramene:AT1G70895.2hmmpanther:PTHR34545hmmpanther:PTHR34545:SF2InParanoid:Q8L9H6
InterPro:IPR033249KEGG:ath:AT1G70895OMA:KTICFFFPANTHER:PTHR34545
PaxDb:Q8L9H6Pfam:Q8L9H6PRO:PR:Q8L9H6Proteomes:UP000006548
RefSeq:NP_001077808.1RefSeq:NP_565004.1STRING:3702.AT1G70895.1TAIR:AT1G70895
tair10-symbols:CLE17TMHMM:TMhelixUniGene:At.35259UniProt:Q8L9H6
Coordinates (TAIR10) chr1:+:26728170..26728469
Molecular Weight (calculated) 11365.80 Da
IEP (calculated) 11.19
GRAVY (calculated) -0.27
Length 99 amino acids
Sequence (TAIR10)
(BLAST)
1: MTHVLVRRQG QGKKRRWDVN MTMCFFLFFF VFYVSFQIVL SSSASVGYSR LHLVASPPPP PPRKALRYST APFRGPLSRD DIYGDDKRVV HTGPNPLHN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)