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AT1G67840.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : chloroplast sensor kinase
Curator
Summary (TAIR10)
Encodes a chloroplast sensor kinase (CSK) that shares common ancestors with cyanobacterial histidine sensor kinases. CSK is synthesised in the cytosol and imported into the chloroplast as a protein precusor. CSK is autophosphorylated and required for control of transcription of chloroplast genes by the redox state of an electron carrier connecting photosystems I and II.
Computational
Description (TAIR10)
chloroplast sensor kinase (CSK); CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); Has 698 Blast hits to 698 proteins in 263 species: Archae - 2; Bacteria - 628; Metazoa - 0; Fungi - 1; Plants - 41; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Protein Annotations
EC:2.7.13.3eggNOG:ENOG410IK9QeggNOG:ENOG410Z19JEMBL:AC008113
EMBL:AY049244EMBL:AY113030EMBL:BX814127EMBL:CP002684
EnsemblPlants:AT1G67840EnsemblPlants:AT1G67840.1EnsemblPlants:AT1G67840.2entrez:843110
ExpressionAtlas:F4HVG8Gene3D:3.30.565.10GeneID:843110Genevisible:F4HVG8
GO:GO:0000155GO:GO:0004673GO:GO:0009507GO:GO:0009570
GO:GO:0010109GO:GO:0010468GO:GO:0016301GO:GO:0018106
GO:GO:0043621GO:GO:0046777GO:GO:0048038GO:GO:0051776
GO:GO:0080005HOGENOM:HOG000077496InParanoid:F4HVG8InterPro:IPR003594
KEGG:ath:AT1G67840ncoils:CoilOMA:MTQMHSLPaxDb:F4HVG8
Pfam:F4HVG8Pfam:PF02518PIR:A96701PRIDE:F4HVG8
PRO:PR:F4HVG8ProteinModelPortal:F4HVG8Proteomes:UP000006548RefSeq:NP_564908.1
RefSeq:NP_974101.1STRING:3702.AT1G67840.1SUPFAM:SSF55874TAIR:AT1G67840
tair10-symbols:CSKUniGene:At.26196UniProt:F4HVG8
Coordinates (TAIR10) chr1:+:25434156..25436839
Molecular Weight (calculated) 66846.90 Da
IEP (calculated) 5.30
GRAVY (calculated) -0.18
Length 611 amino acids
Sequence (TAIR10)
(BLAST)
001: MLLSAIASQT LLSSNPNLHF SNSIPNPRPS NPSLKLLNAS SSSSSSSSSS IFTRGLRYVN HTVSNEESEP GGGETMVASA SAIASAIRGA STTPVEFTQM
101: IEKDHLKTKI ILPSPDFQRL CLEQLDLFRQ IVDPNAVLSI YVRPAGSYVM DRLELRRVTC YPSVNAGDVV ILVGNFGIPA GLRAAEASLS SQQVELVSKH
201: RAAVFPMVKH PFVVGFLVAE LPVEAEEEEE EEEEEKPHGV NQFLSPEEAY ALPASANTKS PRVKLPSVKV FTEEQRSYAI NISRTLAMAY VMDQKTMLLQ
301: QSSWQNNVRM SKLVEQIRGP LSTMRTLSKM LSTHTKRNQI SHDIVEDLIV QGDQIKDTLE ELQDAVHLTK ANIVRHNEEA LKKINKTHNE TRRSKYEHKD
401: PIDGSQISST RLSLGSGLDD SEMPMPPLAL APLQMHSIRP CDISNVLLDM VETVRPLALT QQRVVELGEN SASLQVAVEE PALRQALSNL IEGALLRTHV
501: GGKVEILSTR APAGGSLVVI DDDGPDMRYM TQMHSLTPFG AELLSENMVE DNMTWNFVAG LTVAREILES YGCVIRVISP RSSDAALGAG GTRVELWLPA
601: FPAAVSEANE A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)