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AT1G67830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha-fucosidase 1
Curator
Summary (TAIR10)
Encodes a protein with α-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFXG1 was able to remove the t-fucosyl residues of XXFG xyloglucan oligosaccharides.
Computational
Description (TAIR10)
alpha-fucosidase 1 (FXG1); FUNCTIONS IN: alpha-L-fucosidase activity, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT3G26430.1); Has 3145 Blast hits to 3097 proteins in 87 species: Archae - 0; Bacteria - 62; Metazoa - 0; Fungi - 3; Plants - 3080; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G67830-MONOMERBioCyc:MetaCyc:AT1G67830-MONOMEREC:3.2.1.51eggNOG:ENOG410JS5S
eggNOG:ENOG41118WEEMBL:AC008113EMBL:AK175502EMBL:CP002684
EnsemblPlants:AT1G67830EnsemblPlants:AT1G67830.1entrez:843109Gene3D:3.40.50.1110
GeneID:843109Genevisible:Q9FXE5GO:GO:0004560GO:GO:0009505
GO:GO:0016788GO:GO:0048046Gramene:AT1G67830.1hmmpanther:PTHR22835
hmmpanther:PTHR22835:SF117HOGENOM:HOG000237648InParanoid:Q9FXE5InterPro:IPR001087
InterPro:IPR013830iPTMnet:Q9FXE5KEGG:ath:AT1G67830KO:K01206
OMA:DCHFPAVPaxDb:Q9FXE5Pfam:PF00657Pfam:Q9FXE5
PhylomeDB:Q9FXE5PRIDE:Q9FXE5PRO:PR:Q9FXE5ProteinModelPortal:Q9FXE5
Proteomes:UP000006548RefSeq:NP_176949.1STRING:3702.AT1G67830.1SUPFAM:SSF52266
TAIR:AT1G67830tair10-symbols:ATFXG1tair10-symbols:FXG1UniGene:At.23529
UniGene:At.35596UniProt:Q9FXE5
Coordinates (TAIR10) chr1:-:25431705..25432972
Molecular Weight (calculated) 40463.80 Da
IEP (calculated) 8.16
GRAVY (calculated) -0.13
Length 372 amino acids
Sequence (TAIR10)
(BLAST)
001: MNPILSSLFA LSLLSSLSPS THAHQCHFPA IFNFGDSNSD TGGLSAAFGQ AGPPHGSSFF GSPAGRYCDG RLVIDFIAES LGLPYLSAFL DSVGSNFSHG
101: ANFATAGSPI RALNSTLRQS GFSPFSLDVQ FVQFYNFHNR SQTVRSRGGV YKTMLPESDS FSKALYTFDI GQNDLTAGYF ANKTVEQVET EVPEIISQFM
201: NAIKNIYGQG GRYFWIHNTG PIGCLAYVIE RFPNKASDFD SHGCVSPLNH LAQQFNHALK QAVIELRSSL SEAAITYVDV YSLKHELFVH AQGHGFKGSL
301: VSCCGHGGKY NYNKGIGCGM KKIVKGKEVY IGKPCDEPDK AVVWDGVHFT QAANKFIFDK IAPGLSKACK RQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)