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AT1G67310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:19334764 (2009): plasma membrane
  • PMID:18433157 (2008): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains; FUNCTIONS IN: calmodulin binding, transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: cytosol; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Immunoglobulin E-set (InterPro:IPR014756), Ankyrin repeat-containing domain (InterPro:IPR020683), CG-1 (InterPro:IPR005559), Cell surface receptor IPT/TIG (InterPro:IPR002909), Ankyrin repeat (InterPro:IPR002110), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: signal responsive 1 (TAIR:AT2G22300.2); Has 4214 Blast hits to 2978 proteins in 268 species: Archae - 9; Bacteria - 179; Metazoa - 1855; Fungi - 220; Plants - 413; Viruses - 4; Other Eukaryotes - 1534 (source: NCBI BLink).
Protein Annotations
BioGrid:28272eggNOG:ENOG410XS5MeggNOG:KOG0520EMBL:AC002130
EMBL:AY510026EMBL:CP002684EnsemblPlants:AT1G67310EnsemblPlants:AT1G67310.1
entrez:843051Gene3D:1.25.40.20Gene3D:2.60.40.10GeneID:843051
Genevisible:Q9FYG2GO:GO:0003677GO:GO:0005634GO:GO:0005829
GO:GO:0006351GO:GO:0006355Gramene:AT1G67310.1hmmpanther:PTHR23335
hmmpanther:PTHR23335:SF1HOGENOM:HOG000240102InParanoid:Q9FYG2InterPro:IPR000048
InterPro:IPR002110InterPro:IPR002909InterPro:IPR005559InterPro:IPR013783
InterPro:IPR014756InterPro:IPR020683InterPro:IPR027417iPTMnet:Q9FYG2
KEGG:ath:AT1G67310MINT:MINT-8068164OMA:MVESPEAPaxDb:Q9FYG2
Pfam:PF00612Pfam:PF01833Pfam:PF03859Pfam:PF12796
Pfam:PF13637Pfam:Q9FYG2Pfscan:PS50088Pfscan:PS50096
Pfscan:PS50297Pfscan:PS51437PhylomeDB:Q9FYG2PRIDE:Q9FYG2
PRO:PR:Q9FYG2PROSITE:PS50088PROSITE:PS50096PROSITE:PS50297
PROSITE:PS51437ProteinModelPortal:Q9FYG2Proteomes:UP000006548RefSeq:NP_176899.2
SMART:SM00015SMART:SM00248SMART:SM01076SMR:Q9FYG2
STRING:3702.AT1G67310.1SUPFAM:SSF48403SUPFAM:SSF52540SUPFAM:SSF81296
TAIR:AT1G67310UniGene:At.49316UniProt:Q9FYG2
Coordinates (TAIR10) chr1:-:25198182..25203126
Molecular Weight (calculated) 113070.00 Da
IEP (calculated) 5.17
GRAVY (calculated) -0.49
Length 1016 amino acids
Sequence (TAIR10)
(BLAST)
0001: MSSVAEDNSF TCDIATIFVA ICRNPPANPS DSLFQYEIST LYQEAHSRWL KPPEVLFILQ NHESLTLTNT APQRPTSGSL LLFNKRVLKF FRKDGHQWRR
0101: KRDGRAIAEA HERLKVGNAE ALNCYYAHGE QDPTFRRRIY WMLDPEYEHI VLVHYRDVSE REEGQQTGGQ VYQFAPILST QNVSYNQYIG DSSDIYQQSS
0201: TSPGVAEVNS NLEGSASSSE FGQALKMLKE QLSIGDEHVN SVDPHYIQPE SLDSLQFLEY SDIDHLAQPT TVYQRPENNK LERCYGGNFG AQYSAKNDSN
0301: KLERCYGGYV GGAEYHSSNL MLVKNGSGPS GGTGGSGDQG SESWKDVLEA CEASIPLNSE GSTPSSAKGL LAGLQEDSNW SYSNQVDQST FLLPQDLGSF
0401: QLPASYSALV APENNGEYCG MMEDGMKIGL PFEQEMRVTG AHNQKFTIQD ISPDWGYANE TTKVIIIGSF LCDPTESTWS CMFGNAQVPF EIIKEGVIRC
0501: EAPQCGPGKV NLCITSGDGL LCSEIREFEY REKPDTCCPK CSEPQTSDMS TSPNELILLV RFVQTLLSDR SSERKSNLES GNDKLLTKLK ADDDQWRHVI
0601: GTIIDGSASS TSTVDWLLQE LLKDKLDTWL SSRSCDEDYI TCSLSKQEQG IIHMVAGLGF EWAFYPILAH GVNVDFRDIK GWSALHWAAQ FGSEKMVAAL
0701: IASGASAGAV TDPSRQDPNG KTAASIAASN GHKGLAGYLS EVALTNHLSS LTLEETENSK DTAQVQTEKT LNSISEQSPS GNEDQVSLKD TLAAVRNAAQ
0801: AAARIQAAFR AHSFRKRKQR EAALVACLQE YGMYCEDIEG ISAMSKLTFG KGRNYNSAAL SIQKNFRGYK DRKCFLELRQ KVVKIQAHVR GYQIRKNYKV
0901: ICWAVRILDK VVLRWRRKGV GLRGFRQDVE STEDSEDEDI LKVFRKQKVD VAVNEAFSRV LSMSNSPEAR QQYHRVLKRY CQTKAELGKT ETLVGEDDDG
1001: LFDIADMEYD TLFSLP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)