suba logo
AT1G66540.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
mitochondrion 0.857
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cytochrome P450 superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 3 (TAIR:AT4G37340.1); Has 36477 Blast hits to 36375 proteins in 1869 species: Archae - 65; Bacteria - 6588; Metazoa - 11586; Fungi - 7386; Plants - 9188; Viruses - 3; Other Eukaryotes - 1661 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G66540-MONOMEReggNOG:COG2124eggNOG:KOG0156EMBL:BT030024
EMBL:CP002684EnsemblPlants:AT1G66540EnsemblPlants:AT1G66540.1entrez:842972
ExpressionAtlas:A2RVN3Gene3D:1.10.630.10GeneID:842972GO:GO:0004497
GO:GO:0005506GO:GO:0016705GO:GO:0020037Gramene:AT1G66540.1
InterPro:IPR001128InterPro:IPR002401InterPro:IPR017972OMA:WKRISET
Pfam:PF00067PhylomeDB:A2RVN3PRINTS:PR00385PRINTS:PR00463
PROSITE:PS00086Proteomes:UP000006548RefSeq:NP_176827.2scanprosite:PS00086
SMR:A2RVN3STRING:3702.AT1G66540.1SUPFAM:SSF48264TAIR:AT1G66540
UniGene:At.35758UniProt:A2RVN3
Coordinates (TAIR10) chr1:+:24824837..24826502
Molecular Weight (calculated) 43728.80 Da
IEP (calculated) 6.85
GRAVY (calculated) -0.28
Length 386 amino acids
Sequence (TAIR10)
(BLAST)
001: MVSAPYSEHW RNLRRIGAVE IFSNHRLNSF YTIRRDEIRR LIARLSRSPN ASLEFAKVEM NSMLSNLAFN NIIRMVTGKC YYGDGAEDDP EAKRVRQLIA
101: EAMSCFGAGH AADHLPMLRW ITDFERRVKK IAARLDEFFQ RLVDEKRVAK EKKENTMIDH LLSLQVSQPE YYTDHTIKGT MLSLILAGTD TSAVTLEWAL
201: SSLLNNPEVL KKVRDEIDNQ IGLDRLLEES DIPNLPYLQN IVSETLRLYP AGPLLVPHIS SEDCKVGGYD MPCGTMLLVN VWAIHRDPRL WDDPASFKPE
301: RFEKEGETHK LLTFGLGRRA CPGSGLARRL VSLSLGSLIQ CFEWERIGEE EVDMTEGGGL TMPRAIPLVA MCRARAFVGK IPHESG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)