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AT1G51440.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: galactolipase activity, triglyceride lipase activity, phospholipase A1 activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G30550.2); Has 1155 Blast hits to 1147 proteins in 234 species: Archae - 0; Bacteria - 238; Metazoa - 19; Fungi - 161; Plants - 563; Viruses - 5; Other Eukaryotes - 169 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G51440-MONOMEREC:3.1.1.-eggNOG:ENOG410IQ39eggNOG:ENOG4111RPC
EMBL:AC024261EMBL:AF424572EMBL:AK226962EMBL:AY142023
EMBL:CP002684EnsemblPlants:AT1G51440EnsemblPlants:AT1G51440.1entrez:841569
ESTHER:arath-PLA17Gene3D:3.40.50.1820GeneID:841569Genevisible:Q9C8J6
GO:GO:0004806GO:GO:0008970GO:GO:0009507GO:GO:0016042
GO:GO:0047714Gramene:AT1G51440.1gramene_pathway:3.1.1.3gramene_pathway:3.1.1.32
gramene_pathway:LIPAS-PWYgramene_pathway:LIPASYN-PWYhmmpanther:PTHR31403hmmpanther:PTHR31403:SF6
HOGENOM:HOG000238127InParanoid:Q9C8J6InterPro:IPR002921InterPro:IPR029058
iPTMnet:Q9C8J6KEGG:ath:AT1G51440ncoils:CoilOMA:RFKERCD
PaxDb:Q9C8J6Pfam:PF01764Pfam:Q9C8J6PhylomeDB:Q9C8J6
PIR:F96552PRIDE:Q9C8J6PRO:PR:Q9C8J6PROSITE:PS00120
ProteinModelPortal:Q9C8J6Proteomes:UP000006548RefSeq:NP_564590.1SMR:Q9C8J6
STRING:3702.AT1G51440.1SUPFAM:SSF53474TAIR:AT1G51440UniGene:At.18291
UniProt:Q9C8J6
Coordinates (TAIR10) chr1:+:19070971..19072554
Molecular Weight (calculated) 60324.20 Da
IEP (calculated) 6.62
GRAVY (calculated) -0.54
Length 527 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLSLPITL KNPRFFSSSP QNIFKTQPQT LVLTTKFKTC SIICSSSCTS ISSSTTQQKQ SNKQTHVSDN KREEKAEEEE EEKEVSLREI WREVQGCNNW
101: EGQLDPMNNH LRREIIRYGE FAQACYDSFD FDPHSKYCGS CKYHPSDFFL NLDLHLHKGY TITRYLYATS NINLPNFFQK SKLSSIWSQH ANWMGFVAVA
201: TDEEEVSRLG RRDIVIAWRG TVTYLEWIYD LKDILCSANF GDDPSIKIEL GFHDLYTKKE DSCKFSSFSA REQVLAEVKR LIEYYGTEEE GHKTSITVTG
301: HSLGASLALV SAYDIAELNL NHVPENNYKI PITVFSFSGP RVGNLRFKER CDELGVKVLR VVNVHDKVPS VPGIFTNEKF QFQKYVEEKT SFPWSYAHVG
401: VELALDHKKS PFLKPTKDLG CAHNLEALLH LVDGYHGKDE EAEKRFCLVT KRDIALVNKS CDFLRGEYHV PPCWRQDENK GMVKNGDGQW VLPDRPLLEP
501: HGPEDIAHHL QQVLGKVNDD NFKPTTT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)