AT2G39850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Subtilisin-like serine endopeptidase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Subtilisin-like serine endopeptidase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: plant-type cell wall; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT3G46850.1); Has 4351 Blast hits to 3901 proteins in 675 species: Archae - 80; Bacteria - 1999; Metazoa - 45; Fungi - 97; Plants - 1948; Viruses - 0; Other Eukaryotes - 182 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:16630626..16634100 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 87924.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.77 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.50 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 775 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAIAFHTFLL QLLLFFFASF AEANDSRKTY LVQMKVGGHR YGSSSGHQEL LGEVLDDDST LADAFIYSYK ESFTGFSASL TPRERQKLMR RREVLEVSRS 101: RNLKLQTTRS WDFMNLTLKA ERNPENESDL VVAVIDSGIW PYSELFGSDS PPPPGWENKC ENITCNNKIV GARSYYPKKE KYKWVEEKSV IDVTGHGTHV 201: ASIVAGRKVE KAGYFGLAEG TMRGGVPNAK IAVYKTCWRV IRKNGREDSV CREDNILKAI DDAIADKVDI ISYSQGFQFT PLQKDKVSWA FLRALKNGIL 301: TSAAAGNYAN NGKFYYTVAN GAPWVMTVAA SLKDRIFETK LELEGEDKPI IVYDTINTFE TQDSFYPLLN EKAPPESTRK RELIAERNGY SILSNYDEKD 401: KGKDVFFEFA QINLLDEAIK EREKGAIVLG GKSYDFNESI KLQFPIASIF LDEQKKGKLW DYYKKDQSKE RLAKIHKTEE IPREEGWVPT VAHLSSRGPN 501: CDSFLANILK PDIAAPGLDI IAGWPENVKL SSDRPANDYR HLRFNIMSGT SMACPHATGL ALYLKSFKRW SPSAIKSALM TTSSEMTDDD NEFAYGSGHL 601: NATKVRDPGL VYETHYQDYI DYLCKLGYNT EKLRSHVGSD KIDCSKTEID HDADLNYPTM TARVPLPLDT PFKKVFHRTV TNVNDGEFTY LREINYRGDK 701: DFDEIIVDPP QLKFSELGET KTFTVTVTGI SKRNWNKNRA FMTRNTWLTW TEKDGSRQVR SPIVIYSIKG PKACM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)