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AT1G65970.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.951
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : thioredoxin-dependent peroxidase 2
Curator
Summary (TAIR10)
thioredoxin-dependent peroxidase 2
Computational
Description (TAIR10)
thioredoxin-dependent peroxidase 2 (TPX2); FUNCTIONS IN: oxidoreductase activity, antioxidant activity; INVOLVED IN: cell redox homeostasis; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336), Redoxin (InterPro:IPR013740); BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT1G60740.1); Has 3995 Blast hits to 3995 proteins in 874 species: Archae - 11; Bacteria - 1524; Metazoa - 175; Fungi - 308; Plants - 235; Viruses - 0; Other Eukaryotes - 1742 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G65970-MONOMEREC:1.11.1.15eggNOG:COG0678eggNOG:KOG0541
EMBL:AC009513EMBL:AF121356EMBL:AF332463EMBL:AK227350
EMBL:AY084458EMBL:BT003050EMBL:CP002684EnsemblPlants:AT1G65970
EnsemblPlants:AT1G65970.1entrez:842909Gene3D:3.40.30.10GeneID:842909
Genevisible:Q9SRZ4GO:GO:0004601GO:GO:0005737GO:GO:0051920
Gramene:AT1G65970.1hmmpanther:PTHR10430HOGENOM:HOG000255884InParanoid:Q9SRZ4
InterPro:IPR012336InterPro:IPR013740KEGG:ath:AT1G65970OMA:DEATEGC
PaxDb:Q9SRZ4PeroxiBase:4347Pfam:PF08534Pfam:Q9SRZ4
Pfscan:PS51352PhylomeDB:Q9SRZ4PIR:A96684PRIDE:Q9SRZ4
PRO:PR:Q9SRZ4PROSITE:PS51352ProteinModelPortal:Q9SRZ4Proteomes:UP000006548
RefSeq:NP_176772.1SMR:Q9SRZ4STRING:3702.AT1G65970.1SUPFAM:SSF52833
TAIR:AT1G65970tair10-symbols:TPX2UniGene:At.24993UniGene:At.66846
UniProt:Q9SRZ4
Coordinates (TAIR10) chr1:-:24557527..24558229
Molecular Weight (calculated) 17415.00 Da
IEP (calculated) 5.23
GRAVY (calculated) 0.10
Length 162 amino acids
Sequence (TAIR10)
(BLAST)
001: MAPITVGDVV PDGTISFFDE NDQLQTVSVH SIAAGKKVIL FGVPGAFTPT CSMSHVPGFI GKAEELKSKG IDEIICFSVN DPFVMKAWGK TYPENKHVKF
101: VADGSGEYTH LLGLELDLKD KGLGIRSRRF ALLLDNLKVT VANVESGGEF TVSSAEDILK AL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)