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AT1G65845.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
EMBL:AC007234EMBL:AK117148EMBL:AK119119EMBL:BT006338
EMBL:CP002684EnsemblPlants:AT1G65845EnsemblPlants:AT1G65845.1entrez:842895
GeneID:842895Gramene:AT1G65845.1KEGG:ath:AT1G65845OMA:VHILLCL
Proteomes:UP000006548RefSeq:NP_849846.1STRING:3702.AT1G65845.1TAIR:AT1G65845
TMHMM:TMhelixUniGene:At.16380UniGene:At.19737UniProt:Q9SHX3
Coordinates (TAIR10) chr1:-:24493332..24493782
Molecular Weight (calculated) 11429.50 Da
IEP (calculated) 11.33
GRAVY (calculated) -0.28
Length 104 amino acids
Sequence (TAIR10)
(BLAST)
001: MIMKKTTQAY LLLSLVHILL CLSFQIRAIR PLLAEPPSQI LNPPPPSPVW PSPPCGTNIG SQVTAVGENS CRQIPRPPKT KKKKIPKPLK TKKKKISKPH
101: AAVP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)