AT1G65250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.514 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G65190.1); Has 23233 Blast hits to 22999 proteins in 991 species: Archae - 0; Bacteria - 1242; Metazoa - 1932; Fungi - 104; Plants - 19241; Viruses - 13; Other Eukaryotes - 701 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:24234432..24235550 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42730.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.51 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.38 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 372 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGWLRKKKKP KSDIASERGA KLLEELIECC DGKSNPIKFF SADEILKATN DFSDSNFVLR LEVPFKWYSG KNENHPMILI KKDVGWWSGL RVDRLCRDIA 101: VSSMVSGHKN FMKLVGCCLE LDYPVMVYHS VKKHYKLEIS EQPWKKRMKI AEDIATALAY LHTAFPRPFV YRILSHWNIL LDEDGVAKLT DFSHCVSIPE 201: GETFVRVDRD VGLYSYFADN YVRSGLVSDK TDVFAFGIFM GHRLLLGYEY YFEHYRGEEE ESEDGFDSLM KRHARNLLST LKEDRPMEEI ADSKMIEKMG 301: QISEQERCQM KAFLKLSLRC TGPSEEVPTM VEVAKELNKI QRSLFNDSSS LSSGQTQLDS AQDISSTVVL SN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)