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AT1G69720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : heme oxygenase 3
Curator
Summary (TAIR10)
Encodes a member (HO3) of the heme oxygenase family.
Computational
Description (TAIR10)
heme oxygenase 3 (HO3); FUNCTIONS IN: heme oxygenase (decyclizing) activity, heme binding; INVOLVED IN: oxidation reduction, heme oxidation; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Haem oxygenase-like, multi-helical (InterPro:IPR016084), Haem oxygenase-like (InterPro:IPR016053), Haem oxygenase (decyclizing), plant (InterPro:IPR016951); BEST Arabidopsis thaliana protein match is: Plant haem oxygenase (decyclizing) family protein (TAIR:AT2G26670.1); Has 543 Blast hits to 543 proteins in 142 species: Archae - 0; Bacteria - 177; Metazoa - 122; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 130 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G69720-MONOMERBioCyc:MetaCyc:AT1G69720-MONOMEREC:1.14.14.18eggNOG:COG5398
eggNOG:KOG4480EMBL:AC013289EMBL:AF320022EMBL:AY084250
EMBL:CP002684EnsemblPlants:AT1G69720EnsemblPlants:AT1G69720.1entrez:843308
Gene3D:1.20.910.10GeneID:843308Genevisible:Q9C9L4GO:GO:0004392
GO:GO:0006788GO:GO:0009507GO:GO:0015979GO:GO:0020037
GO:GO:0046872hmmpanther:PTHR35703hmmpanther:PTHR35703:SF2HOGENOM:HOG000265822
InParanoid:Q9C9L4InterPro:IPR016053InterPro:IPR016084InterPro:IPR016951
KEGG:ath:AT1G69720KO:K00510OMA:GKTYSEYPaxDb:Q9C9L4
Pfam:PF01126Pfam:Q9C9L4PhylomeDB:Q9C9L4PIR:B96719
PIRSF:PIRSF030219PRIDE:Q9C9L4PRO:PR:Q9C9L4ProteinModelPortal:Q9C9L4
Proteomes:UP000006548RefSeq:NP_001117574.1RefSeq:NP_177130.1SMR:Q9C9L4
STRING:3702.AT1G69720.1SUPFAM:SSF48613TAIR:AT1G69720tair10-symbols:HO3
UniGene:At.35382UniGene:At.71252UniProt:Q9C9L4
Coordinates (TAIR10) chr1:+:26227178..26228419
Molecular Weight (calculated) 32435.40 Da
IEP (calculated) 7.54
GRAVY (calculated) -0.60
Length 285 amino acids
Sequence (TAIR10)
(BLAST)
001: MATTRLNPSC HFPASTRLSC ESYLGLRTTG RISYARTLTA PRGYLAVKAN GGQASVVTAA AITEKQQKKY PGESKGFVEE MRFVAMRLHT KDQAREGEKE
101: SRSPEEGPVA KWEPTVEGYL HFLVDSKLVY DTLEGIIDGS NFPTYAGFKN TGLERAESLR KDLEWFKEQG YEIPEPMAPG KTYSEYLKDL AENDPQAFIC
201: HFYNIYFAHS AGGQMIGTKV SKKILDNKEL EFYKWDGQLS QLLQNVRQKL NKVAEWWTRE EKSHCLEETE KSFKFSGEIL RLILS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)